Xenorhabdus griffiniae: QL128_13195
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Entry
QL128_13195 CDS
T09400
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QL128_13195 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_13195 (uvrB)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QL128_13195 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QL128_13195 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
BNI5_helical
Motif
Other DBs
NCBI-ProteinID:
WMV71146
LinkDB
All DBs
Position
complement(2979576..2981603)
Genome browser
AA seq
675 aa
AA seq
DB search
MSKETNKVFKLYSDFKPAGDQPSAIRQLQEGLEDGLAHQTLLGVTGSGKTFTIANVIANL
NRPTMILAPNKTLAAQLYSEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVN
EHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDSYLKMMLHLTEGMLIDQRAILRRL
AELQYTRNDQAFQRGTFRVRGEVIDIFPAESDERALRVELFDDEVERLSLFDPLTGQVEY
HVPRYTIYPKTHYVTPRERLLQAMEEIKLELEQRRKILLASDKLLEEQRVTQRTQFDLEM
MNELGYCSGIENYSRYLSGRSAGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRS
RKETLVEYGFRLPSALDNRPLRFEEFEALAPQTIYISATPGNYELEKSGHEVVEQVVRPT
GLIDPEVEVRPVATQVDDLLSEIRIRVANNERVLVTTLTKRMAEDLTEYLEEHGERVRYL
HSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLI
QTIGRAARNLHGKAILYGDKITNSMARAIEETERRRAKQQAFNQEHGIVPQGLKKKIGDI
LKIGQPVNGKGKAKGKNKVTLGTDDYRNLSAKELERKIRELEEKMYQHARDLEFEQAANI
RDQVQALRTQFITNS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaacaaataaggtatttaagttatattctgattttaaaccggcaggcgat
cagccatcggctatcagacaattacaggaagggctggaagatggactagcccatcaaaca
cttctgggggtaactggatcgggtaaaactttcaccattgccaatgttatcgcaaactta
aatcgacccaccatgatccttgcccccaataagacattggcagctcagctttatagcgaa
atgaaagcgtttttccctgagaatgcagtggagtattttgtttcctattacgattattac
caaccagaagcttatgtgcccagttccgatacttttatcgaaaaagatgcttcagtgaat
gaacatatcgaacagatgcgtctgtccgcaacgaaagccttgctggaacgccgtgatgtt
gtggtagtggcttctgtctctgcgatttatggtttaggtgatcctgatagctatttgaaa
atgatgctgcatttaaccgaaggtatgttaattgaccagcgcgctatcttgcgtcgttta
gccgaactgcaatatacccgcaatgatcaggcattccagcgcggaacatttcgggtacgt
ggtgaagtcattgatattttccccgcagaatcggacgaacgtgctttgcgtgtagaattg
tttgatgatgaagtcgaacgcctttccctgtttgatccgctgacagggcaggtcgaatac
catgtaccgcgttataccatctatcccaaaacccactatgttacgccacgtgaacgtctc
ctccaggcgatggaggagatcaaactggagttggaacaacggcgcaagatcctattggcg
tcagataaattattggaagaacagcgtgttacccagcgaacccaatttgatctcgaaatg
atgaatgaattgggttactgctctggtattgaaaactactcccgttatctgtccggccgc
tctgccggtgaaccccctccaacgctgtttgactacctgccggcggatggcttgctggtg
gtggatgaatcccacgttactatcccacagattggcggaatgtaccgaggggatcgctcc
cgcaaggaaacattggtggaatatggtttccgtttgccgtcagcgttggataaccgtcca
ttgcggtttgaagaatttgaggcgttggcaccacagaccatttatatttcagccactccc
ggcaattatgaattggaaaaatccggtcatgaagttgttgaacaagttgtgcgtccaacg
ggactcattgaccctgaagttgaagtccgcccagtggcaacccaagtagatgatcttctg
tctgaaatccgtatccgtgtggcaaacaatgagcgcgtgttggtcaccaccttaaccaaa
cggatggcggaagacctgactgaatatttggaagagcatggtgaacgagtgcgttatctc
cattccgacattgatactgtagaacgggtggaaattatccgtgatcttcgtctcggtgaa
tttgatgttttggttggcattaacttactgcgcgaagggctggatatgccggaagtttcc
ctggtggcaattttggacgcagataaagaaggtttccttcgctcagaacgctccctgatc
caaaccatcggccgtgcagcacgtaacctgcatggtaaggccattttatatggcgacaaa
ataacgaattcgatggcaagagctattgaagaaacagaacgccgtcgagccaaacagcag
gcatttaaccaggaacacggcatcgtaccgcaaggtttaaagaaaaaaattggtgacatc
ctgaaaattggtcagccggttaatggtaaagggaaggctaaaggaaaaaataaagttact
ttgggtacagatgattaccgcaacctgtcagcgaaagagctggagagaaaaatccgtgaa
ctggaagagaaaatgtaccaacatgcacgggatctcgaatttgaacaagcagccaatatt
cgtgaccaggttcaggcattgcggacgcaatttattactaattcctga
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integrated database retrieval system
