Xenorhabdus griffiniae: QL128_14025
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Entry
QL128_14025 CDS
T09400
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03030
DNA replication
xgr03430
Mismatch repair
xgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QL128_14025 (holA)
03430 Mismatch repair
QL128_14025 (holA)
03440 Homologous recombination
QL128_14025 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgr03032
]
QL128_14025 (holA)
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_14025 (holA)
Enzymes [BR:
xgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QL128_14025 (holA)
DNA replication proteins [BR:
xgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QL128_14025 (holA)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QL128_14025 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WMV71295
LinkDB
All DBs
Position
3142582..3143613
Genome browser
AA seq
343 aa
AA seq
DB search
MIRLYPEQLFSQLNEGLRGNYLLWGNEPLLLQESQDSIRKVAEQHGFMEHFTFTLDNHTD
WDEIFSLCQSLSLFASRQSLTLLLPENGPNTTMAERLTKLSALLHSDILLILRGHKLTKA
QENSSWFKAIGQNGVYVSCLTPEQNRLPQWVAQRAKNLGLLLENEANQLLCYCYEGNLLA
MAQALERLSLLYPDNRLTLPRVEEAVNDAAHFSPYHWVDALLAGKIKRAWHILKQLRQED
TETVILLRTIQRELMLLLVLKRQYTTVPLKTLFDQHKIWQNRRALLSTALQRLSQRELQS
AIHLLTQMELRVKQDYSQSIWADLETLSMLLCGKSLPESFLNA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatccgactgtatcctgaacaacttttctcgcagctcaatgaagggctgcgaggcaac
tacctgttgtggggcaatgagccattactattgcaggaaagtcaagacagcatccgcaaa
gtggctgaacaacatggctttatggagcatttcacctttacattggataaccataccgat
tgggatgaaatcttcagcttatgtcagtcacttagcctgtttgccagccgtcagtctctc
actctgctgcttccagaaaatggccctaataccacaatggcagagcggctgaccaagctg
tcagcgttgctgcattcagatattttactgatattgcgcggacacaaactgactaaagca
caagaaaatagctcgtggttcaaagcgattgggcaaaatggggtatatgtcagttgcttg
acacctgagcaaaatcgcctgccacaatgggtggcacaacgtgccaaaaacctggggcta
ttactggaaaatgaagccaatcaattactgtgctattgctatgaaggaaacctattggca
atggcccaagccctggaacgcctttccctgctctatcccgacaatcgattgacacttcct
cgtgtagaagaagctgttaacgatgcggctcacttttctccttatcattgggttgatgct
ttgctggcaggaaaaataaagcgggcatggcatatactgaaacaactgcggcaggaagat
accgagacggttattttgctccgtaccatacagagggaactcatgctactgttggtactt
aagcgtcaatatacgaccgtccctctgaagactttgtttgatcaacacaagatttggcaa
aatcgtagggcattgctgtcaactgcactacagcgtctgtcacagcgagaactgcaatct
gccatacatttgttgacccagatggaactgcgcgtcaaacaggattatagccaatccatt
tgggctgacctggaaacgctttccatgttgttatgcggaaaatcattaccagagagcttt
ctgaatgcctga
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