Xenorhabdus griffiniae: QL128_17110
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Entry
QL128_17110 CDS
T09400
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
xgr
Xenorhabdus griffiniae
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_17110 (sbcD)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QL128_17110 (sbcD)
Archaeal homologous recombinant proteins
QL128_17110 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WMV71828
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Position
3744279..3745496
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AA seq
405 aa
AA seq
DB search
MRIIHTSDWHLGQYFFTKSRAAEHKHFLQWLIEKIVQHQVDALLIAGDIFDTGSPPSYAR
ELYNQFIVALQPTGCQLVILGGNHDSVATLNESKSLLSYLNTTVITHAEPEDITQQIKIL
NNREGHAGAILCAIPYLRPRDIITSQAGQSGAQKQQALQDAITKHYYSLYQQACALREQF
GQPLPIIATGHLTTVGASTTDSVRDIYIGTLEAFPAQSFPPADYIALGHIHRPQLIGKSE
HIRYSGSPIPLSFDEVGQEKSVCLVDFKSGRLDNITLLPIPHYQPMQLIRGNLKQIEEQL
HSFREYQGERPVWLDIEVATQDYLPDIQKRIQALSESLPVEIILLRRSKSTRQLSLSAQN
KETLTELSVNEVFERRLALVEIDDPAQKQRLTTLFKQTLDDISQQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattattcacacatctgattggcatcttggccaatatttttttactaaaagccgt
gccgctgaacataaacactttttacagtggttgattgaaaaaatcgtgcagcatcaggtt
gacgcattgcttattgccggcgatatttttgataccggttctcctcccagctatgcacgt
gaactttataaccaatttattgtggccctacagcccacaggctgccaacttgtcattctc
ggtggaaatcatgattccgtcgccacactcaatgaatctaaatccctgctttcttacctg
aataccactgtcattacccatgctgaacccgaagatataacacagcagataaagatcctg
aataacagagaaggtcatgcaggagcgatcctctgtgccattccctacctgcgtccacgg
gatattatcaccagccaggcggggcaatcaggcgctcaaaaacagcaggccctacaggat
gccatcaccaaacactactatagtctctaccagcaagcctgtgcattacgagaacagttc
ggccagccattaccgattattgccactggtcacctcactacagtgggtgcttccactaca
gactccgttcgcgatatttacattggcacattagaagccttccccgcacaatcatttccg
cctgctgactatattgccctggggcatatccatcgcccgcaactcattggtaaatcagag
catatccgctacagcggttcccctattccactcagctttgatgaagtgggacaggagaaa
agcgtctgcttagtggactttaaatcaggaagacttgataacatcacactgttaccgatc
cctcattatcagccaatgcaacttattcgtggtaatttgaaacaaatcgaagagcaatta
cactcttttagggaatatcaaggagaacgcccggtttggctggatattgaagtcgcaact
caagattatctgcccgatatccaaaaacgcattcaggccctaagtgaaagcctacctgtt
gagattatcttgctacgccgtagcaaaagcactcgccaactgtcactatctgcacaaaat
aaagaaacccttactgaactgagcgtcaatgaggtctttgaacgtcgtttagcactggta
gaaatcgacgatcccgcacaaaaacaacgcctaaccaccctgtttaaacaaacgctggat
gatatttctcagcaataa
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