Xenorhabdus griffiniae: QL128_18015
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Entry
QL128_18015 CDS
T09400
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QL128_18015 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_18015 (recD)
Enzymes [BR:
xgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QL128_18015 (recD)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QL128_18015 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_11
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_22
AAA_16
AAA_28
nSTAND3
UvrD_C
SRP54
DEAD
CbiA
PhoH
AAA
Pif1_2B_dom
DO-GTPase1
FtsK_SpoIIIE
NACHT
NPHP3_N
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
WMV74543
LinkDB
All DBs
Position
complement(3947611..3949518)
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AA seq
635 aa
AA seq
DB search
MMSLLQQAVSQKLLRPLDVQFAYAVIEAENPLLLLITALLSAESGAGHVCLPLERISPKY
FFEGRQPELAASLWSLAGEPDQQQILAVLQACPAVSMGETPAPMILSCQKERDYRLYLQR
MWQSERRVADFFAAVELTDTFTQPSHDQTALDEIQLRRILDALFGATAEGEIDWQKVAAA
VAVTSRISVISGGPGTGKTTTVAKLLATLIKLHQGKKLSIQLAAPTGKAAARLTESLREA
VKKLNLTPEQWHSVPEQAQTLHRLLGAQPDSQKLRYGRDNPLSLDILIVDEASMVDLPMM
AHLVDALPPRAKVIFLGDKDQLASVEAGAVLGDICRFAEQGYSAKRTEQLARLTGCQLTS
YSTLHSDKNMPAVRDSLCLLRKSYRFNSASGIGRLASAVNQGDRRGVAAVLDQSFPDVDF
YPLAADEDYQRLLTETAAGYSQYLAMANERMAEEAILATFNRFRLLCALREGPFGVTGLN
QRVEQLLHRKGVITLPKNVESRGYVGRPIMILRNDSTLGLFNGDIGIMLKNQDNELKAYF
QLSDGQIKGFQPSRLPQHETAYVMTVHKSQGSEFEHTALVLPTQHSPIVSRELVYTALTR
AREKLTIYANKPVLDRAVATATQRRSGLVDWFHPQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcactcttgcaacaggcggtgagccagaagctgctgcgtcctttggatgtgcag
tttgcttatgcggtgattgaggctgaaaatccactactactgttgattacggccttgtta
agtgcagaatcaggtgctgggcatgtctgtttgccactggagcggatttcgccaaaatat
ttttttgaaggcaggcaaccggagttagctgcatcgctttggtctttggccggagaaccc
gatcaacagcaaatcctggctgtgttgcaggcatgtccggcggtcagtatgggggaaacg
ccggcaccgatgatcctttcctgtcaaaaggagcgtgattaccgcctgtatttacaacgt
atgtggcaaagtgaacggcgagttgcggatttttttgctgctgtggagttgaccgacact
tttactcaaccttcccatgatcaaacggcgcttgatgaaatccagttacgtcgcattttg
gatgcgctttttggtgccactgctgaaggagagattgattggcaaaaagttgccgctgcc
gtggcggtaacgagccgtatttcggtgatctctggtgggccaggaaccggtaaaaccacg
acagtagctaagttgctggctaccttgatcaagttacatcaagggaaaaaattaagcatt
caattggctgcaccaaccggcaaggcagcggccagattaactgaatcactgagggaagcg
gtcaagaaactcaatttgacgccagaacagtggcatagcgttccagaacaggcgcaaact
ctccatcgtttactgggggcacaaccggatagccaaaaactgcgttatgggcgtgataat
ccgctgtcccttgatattttgatcgttgatgaggcttcaatggtggatttaccgatgatg
gctcacttggtcgatgctttgccgccgcgggcgaaagtgattttcttgggggataaagac
caacttgcatcggttgaagccggagcggtattgggcgatatttgccgttttgctgaacaa
ggttatagcgccaaacgtactgagcaattggcgcgcttgacgggatgtcagttaacctct
tattccaccttacattccgataaaaatatgcctgccgtgcgggatagcctgtgtttgctg
cgcaaaagttatcgcttcaactcggcttccggcattgggcgattggcatcagctgtgaat
caaggggatcgcagaggtgtcgcggcagtgctggatcaatcttttcccgatgttgatttt
tacccgcttgcagcggatgaagattatcagcgtctgttgacggaaaccgcggcgggttat
tctcaatatttagccatggcaaatgaacggatggcggaagaagctattttggcgacgttt
aatcgttttcgattattgtgcgcgttaagagaagggccctttggtgttacagggctgaac
caacgagtggaacaactactgcacaggaaaggcgtcattaccctccccaaaaatgtggag
agccgtggttatgtcgggcgtcctatcatgatattgcgtaatgacagcacgcttgggctg
tttaacggagatatcggcattatgctcaaaaatcaggataatgagctgaaagcctatttc
cagctatctgatggacagattaaaggatttcagccaagccggttgccccaacatgaaacg
gcttatgtgatgacagtgcataaatctcaaggatctgaatttgagcatacggctttggta
ttgccgacccaacactcacccatagtcagtcgggaattagtgtataccgctctgacgcgg
gcgagggaaaaattgacgatttatgccaataagcccgttttggatagagcggtagctaca
gcaacacagcggcggagcgggttggtagattggttccaccctcaatag
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