Xenorhabdus griffiniae: QL128_19105
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Entry
QL128_19105 CDS
T09400
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xgr
Xenorhabdus griffiniae
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xgr03016
]
QL128_19105 (truB)
Enzymes [BR:
xgr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QL128_19105 (truB)
Transfer RNA biogenesis [BR:
xgr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QL128_19105 (truB)
Prokaryotic type
QL128_19105 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WMV74556
LinkDB
All DBs
Position
complement(4184423..4185364)
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AA seq
313 aa
AA seq
DB search
MGRRRRGRAIHGVLLLDKPQDISSNDALQKVRRIFNASKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIARLGQRTDTSDSHGTIISERDVKITESQLNAALEQFRGDTMQ
VPSMYSALKHQGKPLYEYARQGIEVEREARPITVYELQFIRWEGNELELEIHCSKGTYIR
TIIDDLGELLGCGAHVIYLRRLQVANYPNQRMVTLEQLYELKQQAEDQEIEAWELLDPLL
LPMDTAVVHFPVIHLTSVVASYFKQGQPVRSKHNLASDEWVRVTEGDENKFIGIAMIDDD
GLVAPRRLVVETE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggggcgccgtcgtagaggccgtgctatacacggtgtactgttgctggataagccgcag
gatatttcctccaatgatgcgttacagaaagtcagacgtattttcaatgccagcaaagcg
ggccatactggtgcgttggatccattagcgacaggcatgttgccgatttgtctgggggaa
gcgactaagttttcccaattcttgctggattctgacaaacgttatcgtgtgattgcccgt
ttagggcagcgcacggatacgtcggattcacatggaacaatcatcagtgagcgtgacgta
aaaatcaccgaatctcagcttaatgctgcattggagcaattccgtggtgataccatgcag
gttccttccatgtactctgcattgaaacatcagggaaaaccgctatacgaatatgcccgt
cagggaattgaagtagagcgggaagcgcgtcctatcactgtttatgaattgcaattcatt
cgctgggaagggaatgaattggaattggaaatacactgttccaagggaacttatattcgt
accatcattgatgatttaggggagcttttgggctgtggcgcgcatgtcatttatctgcgt
cgtttgcaggttgccaactatcccaatcaaagaatggtaacgttggaacagttatatgag
ttaaaacaacaggctgaagatcaagaaatcgaagcgtgggaattgcttgatccattattg
ttacccatggataccgccgtggttcattttcctgtcattcacttaacatctgtcgttgcg
tcgtatttcaaacaaggccagccggttcgcagcaaacataatttggcttcagatgaatgg
gtgagggtgaccgaaggagatgaaaataaattcatcggcattgccatgatcgatgatgat
ggactcgtggccccacgccgtctggttgttgaaacggaataa
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