Xenorhabdus griffiniae: QL128_19355
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Entry
QL128_19355 CDS
T09400
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr02024
Quorum sensing
xgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QL128_19355 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QL128_19355 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgr03019
]
QL128_19355 (hfq)
03036 Chromosome and associated proteins [BR:
xgr03036
]
QL128_19355 (hfq)
Messenger RNA biogenesis [BR:
xgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
QL128_19355 (hfq)
Chromosome and associated proteins [BR:
xgr03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
QL128_19355 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
WMV72223
LinkDB
All DBs
Position
complement(4235886..4236188)
Genome browser
AA seq
100 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHGNNQNVPTSVGNYHAGTNSTVQQEGDGAE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttgcaagatccattcctgaacgctttacgacgtgaaagggtc
ccggtttctatttatttggtaaacggcatcaagttgcagggtcagattgaatcttttgac
caatttgtcattttactgaagaacacggttagtcagatggtttataaacatgccatctct
actgttgtgccttcccgtcctgtgtctcatcatggtaacaaccagaatgtaccaactagt
gttggaaattatcatgcgggcactaactcgacagtacaacaggaaggcgatggcgctgaa
taa
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