KEGG   Xenorhabdus griffiniae: QL128_19355
Entry
QL128_19355       CDS       T09400                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
xgr  Xenorhabdus griffiniae
Pathway
xgr02024  Quorum sensing
xgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QL128_19355 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QL128_19355 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xgr03019]
    QL128_19355 (hfq)
   03036 Chromosome and associated proteins [BR:xgr03036]
    QL128_19355 (hfq)
Messenger RNA biogenesis [BR:xgr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     QL128_19355 (hfq)
Chromosome and associated proteins [BR:xgr03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    QL128_19355 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: WMV72223
LinkDB
Position
complement(4235886..4236188)
AA seq 100 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHGNNQNVPTSVGNYHAGTNSTVQQEGDGAE
NT seq 303 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatccattcctgaacgctttacgacgtgaaagggtc
ccggtttctatttatttggtaaacggcatcaagttgcagggtcagattgaatcttttgac
caatttgtcattttactgaagaacacggttagtcagatggtttataaacatgccatctct
actgttgtgccttcccgtcctgtgtctcatcatggtaacaaccagaatgtaccaactagt
gttggaaattatcatgcgggcactaactcgacagtacaacaggaaggcgatggcgctgaa
taa

DBGET integrated database retrieval system