Xenorhabdus griffiniae: QL128_19570
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Entry
QL128_19570 CDS
T09400
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03420
Nucleotide excision repair
xgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QL128_19570 (uvrD)
03430 Mismatch repair
QL128_19570 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_19570 (uvrD)
Enzymes [BR:
xgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QL128_19570 (uvrD)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QL128_19570 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QL128_19570 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMV72259
LinkDB
All DBs
Position
complement(4288677..4290842)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSYLLESLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLSVENASPFSIMAV
TFTNKAAAEMRHRIENLIGTSQGGMWIGTFHSLAHRLLRAHHLDANLPQDFQILDSEDQH
RLIKRIIKAMNLDDKQWPARQGMWYINGKKDEGLRPQHIESYGNPVEATWLKIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPQILQHYRERFTNILVDEFQDTNSIQYAWIRLLAGDS
GKVMIVGDDDQSIYGWRGAQVENIQRFLKDFQGAETLRLEQNYRSTSNILKAANALIAHN
SDRLGKNLWTEGSEGEQISLYCAFNELDESRYVVGRIKHWLDNGGALKECAILYRSNAQS
RVLEEALLQASMPYRIYGGQRFFERQEIKDALSYLRLVANRHDDAAFERVVNTPTRGIGD
RTLDVVRQVARDQQKTLWESSLVLIQEKVLAGRAASALQRFIELIDALETETQEMSLHVQ
TDRIIRDSGLWAMYQQEKGEKAQARIENLEELVTATRQFSYQDEDENLLPLQAFLSHAAL
ESGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSIEEGGRLEEERRLAY
VGVTRAMEKLTLTYAENRRLYGKEVHHRPSRFIGELPTECVAEVRLRATVSRPVSHKRLG
TPISANDSGYALGQRVRHPKFGEGTIINIEGSGEHCRLQIAFQGEGIKWLVAAYARLETG
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgaaagcctcaatgataaacaacgtgaagcggtcgcagct
ccccgtagtaatatgttggtactggctggtgctggcagtggtaaaacgcgcgtgctggtt
catcggattgcttggttactgtcagttgaaaatgcctcgccgttttccatcatggcggtc
acgtttaccaataaagcggctgctgagatgcggcaccgaattgaaaacctgattggcacc
agtcagggtggtatgtggattggtacattccatagccttgctcaccgcttgttgcgcgcc
catcaccttgatgcaaatttgccgcaggatttccagatcctcgatagcgaagatcagcac
cgcctcatcaaacgcatcattaaagcgatgaatctggatgacaaacagtggcctgcccgt
caggggatgtggtacatcaatggcaaaaaagatgaaggattgcgtccacagcacattgaa
agttatggcaatccggtagaggcaacctggctgaaaatctaccaggcttatcaggaggcc
tgtgaccgcgcagggctggtggattttgccgaattgttactacgcgcccatgaactttgg
ctgaacaagccacaaatcttgcaacattatcgtgaacgcttcacgaatattctggtggat
gaatttcaggatactaacagtattcagtatgcctggattcgtcttctggctggtgatagc
ggtaaagtcatgattgtcggggatgatgaccagtccatttatggttggcgtggtgcacag
gtagaaaatatccagcgtttcctcaaggattttcagggagccgaaacgctccgtctggaa
caaaattaccgttcgaccagcaatatccttaaagcggccaatgccctgattgctcataac
agtgatcgtttgggtaagaatttatggacagaaggcagcgagggagagcaaatttcactt
tattgtgccttcaatgaattggatgagtcccgttatgttgttggccgtatcaagcattgg
ttggataatggcggtgcactgaaagagtgtgcgatcctgtatcgaagcaatgctcaatcc
cgcgttttggaagaagccttattgcaggcttccatgccttaccgtatttatggcggccag
cgtttcttcgaacgtcaagaaatcaaagatgccttatcctacttgcgcctggtcgcaaac
cgtcacgatgatgcagcttttgagcgcgtggtgaatacacccacacgtggcattggcgac
agaacactggatgtggtgcgtcaggttgcgcgggatcagcaaaaaactttgtgggaaagt
agtctggtattgatacaggaaaaagtgctggctggacgtgcggcatctgcactgcaacgt
ttcatcgaattgatcgatgcgctggaaacagaaacacaggagatgtcgttgcatgtgcag
accgatcgcattatccgtgattcaggcctatgggcgatgtatcaacaggaaaaaggcgaa
aaggcgcaagcgcgtatcgaaaaccttgaagaattggtcacagcaacccgccaatttagt
tatcaggacgaggacgaaaacctgctgccattacaggctttcctctcccatgctgcgctt
gaatcgggggaaggtcaggcggatgcctatcaggatgcggtgcaactgatgaccttgcat
tcagcgaagggtttggaattcccgcaagtttttattgtcggtatggaagagggcatgttt
ccgagtcagatgtccatcgaagaaggcggtcggctggaagaagagcgtcgtctggcctat
gtaggcgttactcgggcgatggaaaaattgacgctgacttatgcggaaaatcgtcgttta
tatggcaaggaagtacatcatcgcccatcccgttttattggagaattaccgacagaatgc
gtggcagaagttcgtttgcgagcaacggtatcccgcccggtcagccacaaacggctgggc
acacctatcagtgccaatgacagtggttatgctcttggacagcgtgtacgtcatcccaaa
tttggtgaagggacgattatcaatatagaaggtagtggggaacattgccgcttgcaaatc
gcgtttcagggtgaaggtattaagtggctggtagccgcttatgccagactcgaaacaggc
caataa
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