Xenorhabdus griffiniae: QL128_19875
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Entry
QL128_19875 CDS
T09400
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xgr
Xenorhabdus griffiniae
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xgr03009
]
QL128_19875 (rsmB)
Enzymes [BR:
xgr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
QL128_19875 (rsmB)
Ribosome biogenesis [BR:
xgr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
QL128_19875 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
FtsJ
Methyltransf_25
Methyltransf_37
Methyltransf_5
MTS
Cons_hypoth95
Methyltransf_15
TRM5-TYW2_MTfase
PCMT
Methyltransf_12
Methyltransf_4
Methyltransf_11
Ubie_methyltran
BpsA_C
Motif
Other DBs
NCBI-ProteinID:
WMV72309
LinkDB
All DBs
Position
4352334..4353614
Genome browser
AA seq
426 aa
AA seq
DB search
MKNTYNLRSIAAKAITQVLEQGQSLSTVIPELQQKVSDKDKALLQEICFGVMRVLPQLEW
FISQLMAKPLKGKQRIFHYLIMVGIYQLIYTRIPAHAVLAETVNGATNLKRPQLKGVING
VLRQFQRQQQELIERANNKHLHPKWLLERIQKAYPQNWQTIVDANNQKPPMWLRVNQSHH
TAKEYLALLEEANIEAELDTNHLSAIRLLNPCPVSTLPGFSQGWVTIQDRSAQGCAELLE
PRDGESILDLCAAPGGKTTHILEIAPKSKVLAIDIDEQRIKRVKENLQRLNLHAVVKTGD
GRLPHEWAADERFDRILLDAPCSATGVIRRHPDIKWLRRNEDINQLVTLQSEILEAIWPY
LKRNGTLVYATCSILPQENSEQIKAFLARHPDAVLSKTGNSDTPGTQIIPEATGGDGFFY
ARLTKQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacatataacctgagaagcatcgctgcaaaagcaatcactcaagtgcttgag
caagggcaatccctcagcaccgttatacccgaactccaacaaaaagtttctgataaagat
aaggcattgttacaagagatctgttttggtgtgatgagggtattacctcagcttgagtgg
tttatcagtcaactcatggcaaagccattgaaaggaaaacaacgtattttccactaccta
atcatggtgggtatatatcagctgatatatacacgtatacctgcacacgctgtacttgcc
gaaaccgtcaatggcgcaactaatttaaaacgaccacagctgaaaggtgtcattaatggt
gtccttcgccagtttcagcgccaacaacaagaattaatcgaacgggcaaataataaacac
ctacaccccaaatggctgctagaacgcattcaaaaagcatatccacaaaattggcaaact
atagtggatgccaacaaccaaaagccccctatgtggctacgagttaaccaatcccatcac
acagcgaaagaatatcttgcactattagaagaagctaatatagaagcagaattagatacc
aaccatcttagtgctattcgtcttctgaatccctgtcctgtcagtacactacccggattt
agccaaggctgggtaaccattcaggatcgctccgcacagggatgtgcagaacttttagaa
ccacgtgacggtgaatccatactggatctttgtgctgcacctggcggaaaaactactcat
atcctcgaaatagcaccaaaatctaaggtcctcgctatcgatattgatgagcaacgaatt
aagcgagtaaaagagaatttacaacgacttaacttacatgctgtcgttaaaacaggtgat
ggacgccttccacacgagtgggctgctgatgaacgatttgatcgtattcttcttgacgca
ccgtgctctgccacaggggttattcgccgtcatcctgacataaaatggctacgcaggaac
gaagatataaatcaattagttacattgcaatctgaaatccttgaagctatttggccatat
ttgaagcgtaatggcacactggtttatgccacctgttcaattttacctcaggaaaatagt
gagcaaataaaggcatttttggcccgtcatcccgatgctgtattatcaaaaacaggtaat
tcggatactcctggaacacaaattattccagaagctacgggtggtgacggtttcttttat
gcccgactaactaagcaataa
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