Xenorhabdus griffiniae: QL128_20125
Help
Entry
QL128_20125 CDS
T09400
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
xgr
Xenorhabdus griffiniae
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xgr03016
]
QL128_20125 (trmA)
Enzymes [BR:
xgr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
QL128_20125 (trmA)
Transfer RNA biogenesis [BR:
xgr03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
QL128_20125 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_31
Methyltransf_11
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_12
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
WMV72348
LinkDB
All DBs
Position
4384748..4385848
Genome browser
AA seq
366 aa
AA seq
DB search
MQNALPTENYENQLMEKVHRLKGMMLPFSAPEPEVFRSPASHYRMRAEFRIWHEEDDLYH
IMFDQQTKQRIRIDQFPVANQLINKMMQAIIAGVKDNLVLRHKLFQVDYLSTRSNKIIVS
LLYHKKLGDEWREHATALRTQLIAAGFDVQLIGRAAKTKIMLDHDYIDEVLPVAGKTMIY
RQVENSFTQPNANINVHMLEWAIDITKGSKGDLLELYCGNGNFSLALAQNFERVLATEIA
KPSVAAAQFNIAANKIDNVQIIRMSAEEFTQAMNGEREFNRLQGIDLSSYQCETIFVDPP
RSGLDAETLKMVQAYPRILYISCNPETLCQNLETLTQTHKISQLALFDQFPYTHHMECGV
LLEKRT
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgctttgccaacggaaaattatgaaaatcaattgatggagaaagtccatcgt
ctaaaaggaatgatgctcccctttagcgcacctgagcctgaagttttccgttccccggca
tcacattacagaatgcgcgcagaattccgtatctggcatgaagaagatgatctctatcac
attatgtttgatcagcagactaaacagcgtatacgcattgatcaatttccagttgccaat
cagctaatcaataaaatgatgcaggccatcattgctggcgtaaaagacaatctcgtatta
cgccataaactgtttcaagtagattacctttctacccgcagtaacaaaatcattgtctct
ctgctttaccacaaaaaattgggggatgaatggcgtgaacatgcaactgctctgcgaact
caactcatagcagcagggtttgatgtgcaacttattggacgcgcagcaaaaaccaagatc
atgcttgaccatgactatattgatgaagttttgcctgttgcaggcaagacgatgatttac
cgtcaggttgaaaatagcttcacccagccgaatgccaatatcaatgtgcacatgttggaa
tgggcaattgatatcaccaaaggctctaaaggtgacttacttgaactgtattgcggtaat
ggtaatttctctctggcgttggcgcagaattttgaacgagtattggcgacagaaatagcc
aaaccttcagtggctgccgcccaatttaatatcgcagcaaacaaaattgataatgtacag
attatccgcatgtcagcagaagaatttacccaggcgatgaacggagagcgtgagttcaat
cgcttgcaaggaattgatttaagcagttatcaatgtgaaaccatttttgttgatccaccg
cgcagcggactggatgcagagacgctaaaaatggttcaagcatatccacgtattctttat
atttcctgtaatccagaaacgctctgccaaaatctggaaacgctaacacagactcacaaa
atcagccaactggcgctctttgaccaattcccttatacccatcatatggagtgcggtgtt
ctgctagagaaaagaacttag
DBGET
integrated database retrieval system
