Xanthomonas hawaiiensis: PG878_00630
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Entry
PG878_00630 CDS
T09990
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PG878_00630 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_00630 (recB)
Enzymes [BR:
xha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PG878_00630 (recB)
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PG878_00630 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WNH45020
LinkDB
All DBs
Position
132042..135854
Genome browser
AA seq
1270 aa
AA seq
DB search
MSAAPDRDPYLQLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRLGQLLAVTFTEAA
TQELRRRIRERLALAATLVPDADGSLVGAALAATDLSQQTPHQDPPDVALTRAILAAHLA
ASTETPTALRRRLQQAAEDIDLAAIFTIHGFCARVLREHALESGQAFAAPQLLTDDRELL
RDVAADLWRQRAADAAMAEDLVALWPGGPDGMAIDLRELVRHPTLLPAAIAPAPDPSAAR
NTAARELVAALGAHADQAYDAIAAAFDNKVFDGRRARRPSFDKAFEQLWEGSAEAHWVFD
ERSHLDKLLPSRLREFCKDGMQDRVPSSPLFAALDAWQQADAQVRHWYMQRRICLLHALR
ADAAERLAYLKRQRRVQTYDDLVEGVARALEGPHGDALAQRLRAQYAVALVDEFQDTDDR
QWTIFRKVFAPDTANPAPAQDDAAIAPSLSTADDTPPLLALIGDPKQAIYGFRGGDVRTY
LAAAADAERAPPLAHNFRSRPALLAAIDALYAQAGYAEAFLTDGIAFHPVQPGSKRVDAD
LQRGGAPAPALTVWRAPEPPPPPATAKGPGKPKPWSAGRARELCTVACVAAIRSWLADAR
DGTATLLGRPVQAGDIAVLVRSHGEATRIQQALAVAGIPAVAAGRRSLFATDEALELLAL
LQALLDPGDDGRLRAALATVLIGEDAAAIAALDHDGERHRRWQQQALDWRERWQRGGPLA
LIGDLGAAHGQRLLALVDGERRLTNYLQLAELLQEADTRALGPHGLVDWLARRIANADDS
DEAQQLRLESDARRVQIVTLHKSKGLEYPLVFLPYAGIGRNERTPGRHCVVPAPQGGRQL
QWNTGRSGGESDPAWDTAEAAWKQEQRAEDARLLYVGLTRAEHALWIATGAFPQHERTAL
APMLRDLDALQAAAAPGAIVIDTTPPPAQLPRLPPEPAPPVPPARVPQRRVLPEWWVYSF
TQLANADAGSDPMASATVPSSGGSDEPAASEPVSAAVEVDMVDRRFVGNRFGVAMHDVFE
RCDFAAWRTWQPGQPAPAGQATAIVEALQRGGYAEDELEDGTAMLTALVGNTLTVALPEG
TCLAAVPEEQRRNEMEFHFAMRPTRVDALLVLLHRFGVAGERQAFGARQRLEGLMTGLID
LTYQHDGRWYVLDYKSNRLPAYDPDALARAMAHSEYTLQALIYTVALHRWLRFRLGEGYD
YARDFGGVRYLFCRGLDAARDPSPGVHAWRFDPDLIEGVDALFAGAPLKPLSPRERGWGE
GPSAHGAPTP
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcgcccgaccgcgacccctacctgcagctgccgctgcacggcgtgcgcctg
atcgaggccagcgccggcaccggcaagaccttcaccctggccacgctgttcacccgcctg
gtggtcgaacgcggcctgcgcctgggccaactcctcgccgtcaccttcaccgaggccgcc
acccaggagctgcgccgccgcatccgcgagcgcctggcgctggcggcgacactggtcccg
gacgccgacggaagcctcgtaggagcggctttagccgcgaccgacctgtcgcaacaaacg
ccgcaccaagacccacccgacgtcgccctcacccgcgccatcctcgccgcgcacctggcc
gccagcaccgaaaccccgaccgccctgcgccggcgcctgcagcaggccgccgaggacatc
gacctcgccgccatcttcaccatccacggcttctgcgcgcgcgtactgcgcgagcatgcg
ctggaaagcggccaggccttcgccgcgccgcaattgctcaccgacgaccgcgaactgctg
cgcgacgtcgccgccgacctgtggcggcaacgcgccgcggatgcggcgatggccgaggat
ctggtggcgctgtggccgggcggtccggacggcatggccatcgatctgcgcgaactggtg
cggcatccgaccctgttgccggcggcgatcgcgcctgcccccgatccatcggccgcacgt
aacaccgctgcacgtgagttggtcgccgcactgggggctcacgcggaccaggcttacgat
gccattgccgccgctttcgacaacaaggtattcgacggacgccgtgcgcgtcgcccaagt
ttcgacaaggccttcgagcaattgtgggaaggcagcgcagaagcgcattgggtgttcgac
gaacggagccatctcgacaagctgttgccgtcgcgtttgcgcgaattctgcaaggacgga
atgcaagatcgcgtgccttcctcgccgttgttcgccgcattggatgcttggcaacaggca
gatgcacaggtacgccattggtacatgcaacgtcgcatttgtctcttgcacgcactgcgc
gccgacgcagccgaacgcctggcctatctcaagcgccagcgccgcgtgcagacctatgac
gacctggtcgagggcgtggcgcgcgcgctagaaggcccgcacggcgacgccttggcgcag
aggctgcgcgcgcagtacgcggtggccctggtcgacgagtttcaggacaccgacgaccgc
cagtggacgatcttccgcaaggtgttcgcgccggacacggccaatcccgctccggcgcag
gacgacgcggcgatcgcgccatcgctgtccacagcggacgacacgccgccgctgctcgcc
ctgatcggcgatcccaagcaggccatctacggcttccgcggcggcgacgtgcgcacctac
ctggccgccgccgcggacgccgaacgcgcgccgccgctggcgcacaacttccgctcgcgc
cccgcgctgctggcggcgatcgacgcgctgtacgcgcaggccggctatgccgaggccttc
ctcaccgacggcatcgccttccacccggtgcagccgggcagcaagcgcgtcgatgccgat
ctgcaacgcggcggcgcgccggccccggcgctgaccgtgtggcgcgcgccggaaccgcca
ccgccaccggccaccgccaaggggccgggcaagcccaagccgtggagcgccgggcgcgcc
cgcgagctgtgcaccgttgcctgcgtcgcggccatccgcagctggctggccgatgcgcgc
gatggcactgcgacgttgctcggccgccccgtgcaggccggcgatatcgcggtgctggtg
cgcagccacggcgaggccacgcgcatccagcaggcgctggccgttgccggcattcccgcg
gtcgccgccggccgccgcagcctgttcgccaccgacgaggcgctggaactgctggcgctg
ctgcaggcgctgctcgaccccggcgacgacggccgcctgcgcgccgcactggccaccgtg
ctgatcggcgaggacgccgccgccattgccgcactcgaccacgacggcgagcgccaccgc
cgctggcagcagcaggcgctggactggcgcgagcgctggcagcgcggcggcccgctggcg
ctgatcggcgacctcggtgccgcgcacgggcaacgcctgctggcgctggtcgacggcgaa
cgccgcctcaccaactacctgcaactggccgaactgctgcaggaagccgacacccgcgcg
ctcggcccacatggcctggtcgactggctggcgcgacgcatcgccaatgccgacgacagc
gacgaggcgcagcaactgcggcttgagtcggatgcgcgccgcgtgcagatcgtcaccctg
cacaagagcaagggcctggaatatccgctggtgttcctgccgtacgccggcatcggccgc
aacgagcgcacccccggtcgccactgcgtggtcccggcgccgcagggcgggcgccaactg
cagtggaacaccggccgcagcggcggcgagtccgatccggcctgggacaccgccgaagcc
gcctggaagcaggaacagcgcgccgaggacgcgcgcctgctctacgtcggcctgacccgt
gccgaacacgcgctgtggatcgccaccggtgcgttcccacagcacgagcggacagcgctg
gcgccgatgctgcgcgacctcgacgccttgcaggccgccgctgctcccggcgccatcgtt
attgacaccacgccgccgccggcacaactgccgcggctgccgcccgagccggcgccgccg
gtgccgccggcacgggtgccgcagcggcgcgtgctgccggagtggtgggtatacagcttc
acccagttggccaacgccgacgccggcagcgacccgatggccagcgccaccgtgcccagc
agcggcggcagcgacgaacccgccgccagcgagccggtcagcgccgcggtggaggtggac
atggtcgatcgccgcttcgtcggcaaccgcttcggcgtggccatgcacgacgtgttcgag
cgctgcgacttcgccgcctggcgcacctggcagcctggccagccggcgccggccggccag
gccaccgccatcgtcgaagcgctgcagcgcggcggctatgccgaggacgaactggaagac
ggcaccgccatgctcaccgcgctggtcggcaacaccctcaccgtggccctgccggaaggc
acctgcctggccgcggtgccggaggagcagcggcgcaacgaaatggaattccacttcgcc
atgcgcccgacgcgggtggacgcgctgctggtgctgctgcaccgcttcggcgtggccggc
gagcgccaggcgttcggcgcgcggcagcgcctggagggactgatgaccggcctgatcgac
ctcacctaccagcacgacggccgctggtacgtgctcgactacaagtccaaccgcctgccg
gcctacgaccccgacgcgctggcgcgggcgatggcgcacagcgaatacaccctgcaggcg
ctgatctacaccgtggccctgcaccgctggctgcgcttccgcctgggcgagggctacgac
tacgcccgcgacttcggcggcgtgcgctacctgttctgccgcggcctggacgccgcgcgc
gacccgtcgccgggcgtacacgcctggcgcttcgacccagacctgatcgaaggcgtcgac
gccctgttcgccggcgccccgctcaagcccctctccccccgggagaggggttggggtgag
ggtccgtccgcccacggagccccaaccccgtga
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