Xanthomonas hawaiiensis: PG878_03965
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Entry
PG878_03965 CDS
T09990
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha00300
Lysine biosynthesis
xha00470
D-Amino acid metabolism
xha01100
Metabolic pathways
xha01110
Biosynthesis of secondary metabolites
xha01120
Microbial metabolism in diverse environments
xha01230
Biosynthesis of amino acids
Module
xha_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PG878_03965 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PG878_03965 (dapF)
Enzymes [BR:
xha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PG878_03965 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WNH45636
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Position
923323..924180
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AA seq
285 aa
AA seq
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MSEARHAAHLRFSKMQGAGNDFVVLDLRDGTPPPDAALAVRLADRHFGVGCDQILTIEAP
RDAAAVASYRIWNTDGSAAGQCGNGARCVAAWLVRDGSAPAADTFVIESPAGSHHITRSA
TGEFAVAMGVPRFAPEDVPLVGFPRARDEYVLPLQGGSVRFGAVSMGNPHAVLEVGLVDA
APVERLGPLLQQHASFPDSVNVGFVQVIDRGHLRLRVYERGVGETLACGSGACAAAAVMM
QRGRVERDVRVNLPGGELRVQWPDDSAPVVMSGPATFVFDGEWIR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggcccgccacgccgcgcacctgcgtttcagcaagatgcagggcgcgggcaac
gatttcgtggtgctcgacctgcgcgacggcaccccgccgccggacgccgcactggcggtg
cgcctggccgaccgccacttcggcgtcggctgcgaccagatcctgaccatcgaggcgccg
cgcgatgccgcggcagtggccagctaccgcatctggaacaccgacggcagcgccgccggg
caatgcggcaatggcgcgcgctgcgtcgccgcctggctggtgcgcgacggcagtgcgccg
gccgccgacacgttcgtgatcgaaagccccgccggcagtcaccacatcacccgcagcgcc
accggcgagttcgccgtggccatgggcgtgccgcgcttcgctccggaggacgtgccgctg
gtcggcttcccgcgtgcgcgcgacgagtacgtgctgccgctgcagggcggcagcgtgcgc
ttcggcgcggtgtcgatgggcaacccgcacgcggtgctggaagtgggtctggtcgatgcg
gcgccggtggagcgcctggggccgttgctgcagcagcacgcttcgttcccggattcggtc
aacgtcggcttcgtgcaggtgatcgaccgcggccacctgcgcctgcgcgtgtacgagcgc
ggggtcggcgagaccctggcctgcggcagcggcgcctgcgccgcggccgcggtgatgatg
cagcgcggccgggtggagcgcgacgtgcgcgtcaacctgcccggcggcgagctgcgcgtg
cagtggccggacgacagcgcaccggtggtgatgtccggaccggcgacgttcgtcttcgat
ggagaatggatccgatga
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