Xanthomonas hawaiiensis: PG878_04365
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Entry
PG878_04365 CDS
T09990
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PG878_04365 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xha03021
]
PG878_04365 (rpoA)
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_04365 (rpoA)
Enzymes [BR:
xha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PG878_04365 (rpoA)
Transcription machinery [BR:
xha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PG878_04365 (rpoA)
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PG878_04365 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WNH45706
LinkDB
All DBs
Position
990099..991097
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHTGDSATLSLSKQGPGTVTAADIKTDHN
VEILNNDHVICHLTKDTAINMRLKIERGFGYQPAAARRRPDEETRTIGRLVLDASFSPVR
RVAYAVESARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPASNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccgcgtgggccgcagatcgaacgccttacc
gacaaccgcgccaaggtcgtgatcgagcccttggagcgcgggtatgggcatacgctgggc
aacgccctgcgtcgcgtgctgctgtcctcgattcccggcttcgcgatcaccgaagtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaagggctgcaggaggacgtgctggaa
gtcctgctgaacctcaaggacgtggccatccgcatgcataccggtgacagcgccacgctg
tcgctgtccaagcagggtccgggcacggtcactgccgccgacatcaagaccgaccacaac
gtcgagatcctcaacaacgaccacgtgatctgccacctgaccaaggacacggcgatcaac
atgcgtctgaagatcgagcgtggcttcggctaccagccggccgccgcgcgtcgccgtccg
gacgaagagacccgcaccatcggccgcctggtcctggacgcgtcgttctcgccggtgcgc
cgcgtcgcctacgcggtcgagtcggcccgcgtcgaacagcgcaccgacctggacaagctg
gtcctggatatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgaccagctgtcggtgttcggcgacttcacccatcgcgaccgtggcgcg
gccaagccggccagcaacggcgtggatccggtgctgctgcgtccgatcgacgatctggaa
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtggagctgctcaagaccccgaacctgggcaagaagtcgctcacc
gagatcaaggaagtgctggcccagcgtggcctgtcgctcggcatgaagctggagaactgg
ccgccggccggcgtcgcccagcacggcatgctcggctga
DBGET
integrated database retrieval system
