Xanthomonas hawaiiensis: PG878_04805
Help
Entry
PG878_04805 CDS
T09990
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xha
Xanthomonas hawaiiensis
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PG878_04805
Enzymes [BR:
xha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PG878_04805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
WNH45782
LinkDB
All DBs
Position
1084250..1086115
Genome browser
AA seq
621 aa
AA seq
DB search
MLSPPGFGIGAMDSRVGFERADRHADACSGVTRALQRAQAMKMSSATGRPGSRRCFSFLC
ILLLAAVGATAQRGAAAPISEAPASARAAGFGLSERPDAYVVDTGAGLTFAVRRIAGRSG
LQSAGGLCSLRWHGVEYQDPAKDSHVNSGFAGLYADAGPVAVAARQLDADTIRVTVRSGD
LVHYYLARRGEPRIYMADRFSSEPKPGLLRFVVRVPWVLLPHGPEPADLHGTDRTIEAHD
VFARPDGQTRSKHYSNMRLLDWRYFGATGAHVGMWMVRDDNEGGSGGPFYRSLLDQGTVD
QELTYIVNYGEGQTEPFRTGVLDAYTLVFTDGAPPGPVDTGWFAGAGLDGYVPPAARGAV
AGTARGLDPAFAYTVGFASAQAQYWTGVGADGRFERSGMLPGVYRVTLYKNELAVAQGEA
TVVAGRAVAAGTLRADDPDRVPALWRIGRWDGSPGEFLNGDKVATMHPSDVRMASWRTAP
FTVGASSAAQDFPAYQWQDVNDALHVRFVLERLPAAPPTLRIGITTAAFHGRPVPAIGGW
QAAVPTASQQPTSRTLTVGTYRGNNAVYRFVIPLSALKVGSNDLTLSVASGQHGQGFLSP
GVAYDAIDLIQDVPAGVAAAR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgccccctggtttcggcattggcgcaatggacagtcgggttggcttcgagcgt
gcggatcgacatgccgacgcgtgttccggcgtcaccagggcattgcagcgcgcacaggca
atgaaaatgtcgagcgcaactgggcgtccgggatcgcgacggtgcttctccttcctgtgc
atcctgctgctcgccgcggtcggtgccacggcgcagcgcggcgctgcggcgccgatatcg
gaggccccggcgtccgcgcgcgcggcagggttcggactcagcgaacgcccggatgcctat
gtcgtcgacaccggggcggggttgaccttcgccgtgcggcgcatcgccggccgcagtggt
ttgcagagcgcgggcggtctgtgttcgctgcgctggcatggcgtcgagtaccaggatccg
gccaaggacagccacgtcaactcgggcttcgccggcctctatgcggatgccgggccggtc
gccgtcgcggcgcgacaactcgatgccgacacgatccgggtgacggtgcgctcgggcgat
ctggtccactattacctggcccggcgcggcgagccgcgcatctacatggccgaccgcttc
agcagcgaacccaagcccgggctgctgcgcttcgtcgtgcgcgtgccctgggtgctgctc
ccgcatggtcccgaacccgcggacctgcacgggaccgaccggacgatcgaggcgcacgat
gtgttcgcccgcccggacgggcagacccgctcgaaacactattccaacatgcggctgctc
gactggcgctacttcggcgcgaccggtgcgcatgtggggatgtggatggtgcgcgacgac
aacgagggcggctccggcggcccgttctaccgcagtctgctggaccagggcaccgtcgac
caggaactgacctacatcgtcaattacggcgaaggccagaccgagccgttccgtaccggc
gtcctcgatgcctacacgctggtcttcaccgatggcgcgccgccggggccggtcgatacc
gggtggttcgccggtgccggcctggacggctacgtgccgccggcggcgcgcggcgcggtg
gccggtacggcacgcggactcgatcccgcctttgcctacacggtgggtttcgcctcggcg
caggcgcagtactggaccggcgtcggcgcggacgggcgtttcgaacgcagcggcatgctg
ccgggcgtctaccgggtgacgctctacaagaacgaactggccgtggcgcagggcgaggcc
actgtggtggccggccgtgccgtggccgccgggacgctgcgcgccgacgatccggaccgc
gtgccggcgttgtggcggatcgggcgctgggacggctcgccgggcgaattcttgaacggc
gacaaggtggcgaccatgcacccgtcggatgtgcgcatggcgagttggcggactgcgcca
ttcacggtcggtgcgtcgtcagcggcgcaggactttcccgcgtatcaatggcaggacgtg
aacgacgcgctgcacgtgcgcttcgtcctcgagcgcctgccggcggcgccgccgacattg
cgcatcggcatcactaccgccgcttttcatgggcgcccggtgcccgcgatcggcgggtgg
caggcggcggttcccacggcgtcgcagcaaccgacctcgcgcacgctgacggtcggcacc
tatcgcggcaacaacgccgtctatcgcttcgtcatcccgttgtccgcgttgaaggtcggg
agcaacgacctgacgttgagcgtcgccagcggtcagcacgggcagggtttcctcagtccg
ggcgttgcgtacgatgcgatcgatctgatccaggacgtgccggcgggcgtcgcggcggcg
cgctga
DBGET
integrated database retrieval system
