Xanthomonas hawaiiensis: PG878_05580
Help
Entry
PG878_05580 CDS
T09990
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PG878_05580 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_05580 (uvrA)
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG878_05580 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PG878_05580 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_23
RsgA_GTPase
AAA_21
nSTAND1
AAA_25
nSTAND3
NACHT
DnaJ_CXXCXGXG
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
WNH45926
LinkDB
All DBs
Position
complement(1245317..1248313)
Genome browser
AA seq
998 aa
AA seq
DB search
MAMDYIRIRGARTHNLKNLDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDIDHIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQP
RCPDHGYPLEAQTVSQMVDQVLTLDPEQRYMLLAPVIRERKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPALALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLADGMVAVQSLD
DTAAAPHLFSSKYSCPVCDYSLPELEPRLFSFNAPMGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAPWQSLPASVRQAVLYGSGDETITF
TYFTDAGGRTQRKHRFEGIIPNLERRYRETESPAVREELAKYISERPCPDCKGARLNKAA
RNVFVADRPLPDLVVLPIDDALSFFRQLDLPGWRGEIASKIVKEIAERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADYVLDIGPGAGVHGGEVVGQGSVQDLLKAPRSLTGQYLSGKRRI
EIPAKRHKANPKMTLHLRGATGNNLKNVDLDIPAGLLTCITGVSGSGKSTLINDTLFTLA
ANEINGASHSVAPYREIEHLDLFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVP
EARSRGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEIL
YKGFNINDVLEMTVEDALKLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILVTGTPEDVAACPQSYTGQFLARMLPSTSARPEQPAAMANKPDA
RPPRKVKPEKPAKKAVAAKSGKASKSTTGTGTKKKKDV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggattacatccgcatccgcggcgcgcggacgcacaacctcaagaacctcgac
ctcgacctgccgcgcgacaagctgatcgtgatcaccggcctgtccgggtccggcaagtcc
tcgttggcgttcgacaccatctacgccgaaggccagcgccgctacgtggagtcgctgtcg
gcgtacgcgcggcagttcctcagcgtgatggagaagcccgacatcgatcacatcgagggc
ctgtcgccggcgatcgcgatcgagcagaagtcgacctcgcacaacccgcgctccaccgtc
ggcaccatcaccgagatctacgactacctgcgcctgctgtacgcgcgcgtcggccagccg
cgctgccccgaccacggctacccgctggaggcgcagacggtcagccagatggtcgaccag
gtactgaccctggacccggagcagcgctacatgctgctggcgccggtgatccgcgagcgc
aagggcgagcatgcgcaggtgttcgagcaactgcgcgcgcagggcttcgtgcgcgtgcgc
gtggacggcgagctgtacgagatcgacgcggtgccggcgctggcgctgcgccagaagcac
accatcgaggcggtgatcgaccgcttccgcccgcgcgaggacatcaagcagcgcctggcc
gagagcttcgagaccgcgctgaagctggccgacggcatggtggcggtgcagtcgctggac
gacaccgcggccgcgccgcacctgttctcctccaagtacagctgcccggtctgcgactac
tcgctgccggagctggaaccgcgcctgttctcgttcaacgcgccgatgggcgcctgcccg
agctgcgatggcctgggcgtggccgagttcttcgatcccgatcgggtcgtggtgcatccg
gagctgtcgctgtcggccggcgcggtgcgcggctgggaccgtcgcaacgcgtactacttc
cagctgatcgcctcgctggccaagcactacaagttcgatgtcgacgcgccctggcagtcg
ctgccggcgagcgtgcgccaggcggtgctgtacggcagcggcgacgagaccatcaccttc
acctacttcaccgacgccggcggccgcacccagcgcaagcatcgcttcgaaggcatcatc
cccaacctggaacgccgctaccgcgagaccgaatcgccggcagtgcgcgaggaactggcc
aagtacatcagcgaacggccgtgcccggactgcaagggcgcgcgcctgaacaaggccgcg
cgcaacgtgttcgtggccgaccgtccgctgccggacctggtggtgctgccgatcgacgac
gcgctgagcttcttccgccagctcgacctgcccggctggcgcggcgagatcgccagcaag
atcgtcaaggagatcgccgagcggctgggcttcctggtcgacgtcggcctggattacctg
accctcgagcgtaaggccgacaccctgtccggcggcgaggcgcagcgcatccgcctggcc
agccagatcggcgccggcctggtcggcgtgatgtacgtgctcgacgaaccgtcgatcggc
ctgcaccagcgcgacaacgaacgcctgctcggcaccctcacccgcctgcgcgacctcggc
aacacggtgatcgtggtcgagcacgacgaggacgcgatccgcctggccgactacgtgctg
gacatcggccccggcgccggcgtgcacggcggcgaggtggtcggccagggcagcgtgcag
gatctgctcaaggcgccgcgttcgctgaccgggcaatacctgtccggcaagcgccgcatc
gagatcccggccaagcgccacaaggccaatccgaagatgaccctgcacctgcgcggggcc
accggcaacaacctcaagaacgtcgacctggacatcccggccggcctgctgacctgcatc
accggcgtgtccggctcgggcaagtcgacgctgatcaacgacaccctgttcaccctggcg
gcgaacgagatcaacggcgcctcgcacagcgtggcgccgtaccgcgagatcgagcacctg
gacctgttcgacaaggtcgtggacatcgaccagtcgccgatcggacgcaccccgcgctcc
aacccggccacctataccggcctgttcaccccgctgcgcgaactgttcgcgcaggtgccg
gaagcgcgctcgcgcggctactcgccgggccgcttcagcttcaacgtgcgcggcggccgt
tgcgaggcctgccagggcgacggcctgatcaaggtggagatgcacttcctgccggacgtg
tacgtgccctgcgacgtctgccacggcaagcgctacaaccgcgagacgctggagatcctg
tacaagggcttcaacatcaacgacgtgctggaaatgaccgtcgaggatgcgctgaagctg
ttcgagccggtgccgtcgatcgcgcgcaagctggaaacgctggtcgacgtgggcctgagc
tacatcaagctcggccagagcgcgaccaccctgtccggcggcgaagcgcagcgcgtgaag
ctgtccaaggaactgtcgcggcgcgataccggccgcaccctgtacatcctcgacgagccg
accaccggcctgcacttccacgacatcgaggcgctgctgggcgtgctgcacaagctgcgc
gacgaaggcaacaccgtggtggtgatcgaacacaacctggacgtgatcaagactgcggac
tggatcgtcgacctcggcccggaaggcggccaccgcggcggcaccatcctggtcaccggc
acgccggaagacgtggcggcctgcccgcagtcgtacaccggccagttcctggcacggatg
ctgccctccaccagcgcgcgcccggagcagccggcggcgatggccaacaagcccgatgcg
cgcccgccacgcaaggtcaagccggaaaagccggcgaagaaggccgtggccgccaagagc
ggcaaggccagcaagagcaccaccggtaccggcaccaagaagaagaaggacgtttga
DBGET
integrated database retrieval system
