Xanthomonas hawaiiensis: PG878_06070
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Entry
PG878_06070 CDS
T09990
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha00300
Lysine biosynthesis
xha00470
D-Amino acid metabolism
xha01100
Metabolic pathways
xha01110
Biosynthesis of secondary metabolites
xha01120
Microbial metabolism in diverse environments
xha01230
Biosynthesis of amino acids
Module
xha_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PG878_06070
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PG878_06070
Enzymes [BR:
xha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PG878_06070
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WNH46019
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All DBs
Position
complement(1366690..1367943)
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AA seq
417 aa
AA seq
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MSLRIDPTPLQVALARLRAQADGPVCAYVYDLAALQAHAAMLRAQLPAGCELFYAAKANA
EPPVLRTLAPWVDGFEAASGGELQWLHTHQPGRRLLFGGPGKLDTELQLAASLPDCSVHV
ESLGELQRLARIAASRTRPLSVFLRLNIVVPGMQDTRLVMGGRPSPFGLDADDLDAAMQG
LRGASGLRLDGFHFHLLSHQRDAQLQLRLIAHYLQTVQGWRQAYALGPLTVNAGGGFGVD
YADPAASFDWAAFCAGLPTLLRTHGEGLRLRLEPGRYVSAACGWYLMEVLDIKRSHGAQF
AIGRGGTHHFRTPAAQGHDHPFLVLRGPQPPVLRDARVTLVGQLCTPKDVLARDQPVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMLFLDGPAQAADAMPQRRIADPATAAS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcatcgatcccaccccgctgcaggtggcgctggcgcggctgcgcgcacag
gccgacggcccggtctgcgcctatgtctacgacctggcggcgctgcaggcgcacgcggcg
atgctgcgcgcgcagctgccggccgggtgcgaacttttctacgcggccaaggccaacgcc
gagccgccggtgctgcgcacgctggcgccgtgggtggacggcttcgaggcagcttccggc
ggcgagctgcagtggctgcacacgcaccagccaggacgccgcctgttgttcggcggcccc
ggcaagctcgataccgaactgcagttggccgccagcctgcccgactgcagcgtgcatgtg
gaaagcctgggcgaattgcagcggctggcccgcatcgccgcgtcgcgcacgcgcccgctg
tcggtgttcctgcgcctgaacatcgtggtgccgggcatgcaggacacgcgcctggtgatg
ggcgggcggccctcgccgttcggcctggacgcggacgatctggacgcagccatgcagggg
ctgcgcggcgcgagcgggctgcggctggacggcttccacttccacctgctgtcgcaccag
cgcgatgcgcagctgcaactgcgcctgatcgcgcactacctgcagaccgtgcagggctgg
cgccaggcctatgcgctggggccgctgacggtgaatgccggtggcggcttcggcgtggac
tacgccgatccggcagcttcgttcgactgggccgcgttctgcgcgggcttgccgacgctg
ctgcgcacgcacggcgaaggcctgcgcctgcgcctggaaccgggccgctacgtcagcgcc
gcctgcggctggtacctgatggaagtgctggacatcaagcgcagccatggcgcgcagttc
gccatcggccgcggcggcacccatcatttccgcacgcccgccgcgcagggccacgatcat
ccgttcctggtgctgcgcggcccgcagcctccggtgctgcgcgatgcgcgggtgaccctg
gtcgggcagctgtgcacgcccaaggacgtgctggcccgcgaccagccggtggccgcgctg
gcgccgggcgactgcctggcgtttccgctggccggcgcctacgcctggaacatctcgcac
cagcagttcctgatgcatccgccaccgcagatgctgttcctcgacggcccggcgcaggcc
gccgacgcaatgccgcagcgccgcattgccgacccggccaccgccgcgtcatga
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