Xanthomonas hawaiiensis: PG878_06320
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Entry
PG878_06320 CDS
T09990
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG878_06320 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xha03019
]
PG878_06320 (recQ)
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_06320 (recQ)
Enzymes [BR:
xha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG878_06320 (recQ)
Messenger RNA biogenesis [BR:
xha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PG878_06320 (recQ)
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PG878_06320 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WNH46065
LinkDB
All DBs
Position
complement(1427433..1429241)
Genome browser
AA seq
602 aa
AA seq
DB search
MSSPAHALLSRVFGYDQFRGLQQDIVEHVAAGYDALVLMPTGGGKSLCYQIPSLLRDGTG
IVISPLIALMQDQVEALRQLGVRAEYLNSTLDGETAQRVERDLLAGELDLLYVAPERLLT
PRFLSLIERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQTPRIALTATADPPT
QREIAERLDLAQARHFVSSFDRPNIRYTVVQKDNARRQLLDFLRAHRGSAGIVYCMSRRK
VEETADFLAREGLNALPYHAGLPAEVRADNQRRFLREDGIVMCATIAFGMGIDKPDVRFV
AHTDLPKSLEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQGEAGEERKRVERRK
LDQLLGYCESMQCRRQVLLAGFGETYPQPCGNCDNCLQPADAWDATVAVQKALSCVYRSG
QRFGVGHLIDILRGNEGEKIKQFGHDQLSTYGIGKDLDARAWRGVFRQLVATGLLEVDSD
AYGGLRLTDASRQVLKGERKIMMRRELPSRGRERGDRSGSPRTGVPVQAQDLPLFNALRD
LRAGLAKEQNVPAFVIFHDSTLRNIAEQRPTSLDELARVGGIGGSKLARYGQQLLEVVHA
QG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccccgcccacgccttgctcagccgcgttttcggctacgaccagttccgcggc
ctgcaacaggacatcgtcgaacacgtcgccgccggctacgacgcgctggtgctgatgccc
accggcggcggcaagtcgctgtgctaccagatcccctcgctgctgcgcgacggcaccggc
atcgtgatttcgccgctgatcgcgctgatgcaggaccaggtcgaggcgctgcgccagctc
ggcgtgcgtgccgaatacctcaactccaccctggacggcgagaccgcgcagcgggtcgag
cgcgatctgctggccggcgaactggacctgctgtacgtcgccccggaacggctgctgacc
ccgcgcttcctgtcgctgatcgagcgcagccgcatcgccctgttcgccatcgacgaggcg
cactgcgtgtcgcaatggggccacgacttccgccccgagtaccgccagctcaccgtcctg
cacgagcgctggccgcagaccccgcgcatcgccctcaccgccaccgccgacccgccgacc
cagcgcgagatcgccgagcgcctggacctggcgcaggcccgccatttcgtcagctccttc
gaccgccccaacatccgctacaccgtggtgcagaaggacaacgcgcggcgccagttgctg
gacttcctgcgcgcgcaccgcggcagcgccggcatcgtctactgcatgtcgcggcgcaag
gtcgaggaaaccgccgacttcctggcccgcgagggcctcaacgccctgccctaccacgcc
ggcctgccggccgaggtacgcgccgacaaccagcgccgcttcctgcgcgaggacggcatc
gtgatgtgcgccaccatcgccttcggcatgggcatcgacaagcccgacgtgcgcttcgtc
gcccacaccgacctgcccaagtcgctggagggctactaccaggagaccggccgcgccggc
cgcgacggcgaggccgccgaggcctggctgtgctacggcctgggcgacgtggtgctgctc
aagcagatgatcgagcagggcgaggccggcgaagaacgcaagcgcgtggaacggcgcaag
ctcgaccagttgctgggctactgcgaatcgatgcagtgccgccgtcaggtgctgctggcc
ggcttcggcgagacctatccgcagccctgcggcaactgcgacaactgcctgcagccggcc
gacgcctgggacgccacggtcgcggtgcagaaggcgctgagctgcgtgtaccgcagcggc
cagcgcttcggcgtcggccacctgatcgacatcctgcgcggcaacgaaggcgagaagatc
aagcagttcggccacgaccagctcagcacctacggcatcggcaaggacctggacgcgcgc
gcctggcgcggcgtgttccggcaactggtcgccaccggcctgctggaagtggacagcgac
gcctacggcggcctgcgcctcaccgacgccagccgccaggtgctcaagggcgaacgcaag
atcatgatgcgccgcgaactgcccagccgtggccgcgaacgcggcgaccgcagcggcagc
ccgcgcaccggggtgccggtgcaggcgcaggacctgcccctgttcaacgcgctgcgcgac
ctgcgcgccggcctggccaaggagcagaacgtgccggccttcgtgatcttccacgacagc
accttgcgcaacatcgccgagcagcgcccgaccagcctggacgaactggcgcgggtcggc
ggaatcggcggcagcaagctcgcgcgctacggccagcaactgctcgaggtggtgcacgcc
cagggctga
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