Xanthomonas hawaiiensis: PG878_07445
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Entry
PG878_07445 CDS
T09990
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03030
DNA replication
xha03430
Mismatch repair
xha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG878_07445 (dnaE)
03430 Mismatch repair
PG878_07445 (dnaE)
03440 Homologous recombination
PG878_07445 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xha03032
]
PG878_07445 (dnaE)
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_07445 (dnaE)
Enzymes [BR:
xha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG878_07445 (dnaE)
DNA replication proteins [BR:
xha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG878_07445 (dnaE)
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG878_07445 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WNH46275
LinkDB
All DBs
Position
complement(1711831..1715421)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSTSRFAHLHIHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADLLIADGTQAPWRLTVLCRNRDGYLSLSRLLTRAWLEG
HRSEGGVALRPEWLQTGSDNLFALAGRESLAGRLASEGRHDLAEQQLADWQRIFGDGLHL
ELTRTGRDGEEAFNQFALHAAGTRGLPVIASNDVRFLYASDFAAHEARVCISSGRVLDDP
KRPRDYSDQQYLKSAEEMAALFADIPDAIDNTLALAQRCNIEMQLGTYFLPAYPVPDDET
LDSWIRSQSRDGLAARLEKNPLAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRDRVSQIITYGTMAAKAVVRDCGRVLGFPYGLVDGVAKLIPNILGIT
LKDAMGEGKDSEMASPELIQRYQAEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPTPLS
DFCPLFAEHDVDNLGRNPVTQFDKDDVEQVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIPPVEIAAIPLDDAPTYKGIFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPSFNARKHGQEEIVYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVGEAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVLPPRINASAYMFEA
ATPDTIQYGLGAIKGVGRGACEAIVAERERGGEYASLLDFCTRVESAKLNKRTLEAMINA
GAMDGLGANRATLMLQLPEVMKATEQMARERASGQNSLFGGADTSAPALRLDLPESKEWP
LGQLLAGERETLGFYLSGHPFDPYRDEVRELVGCDLGALEKICAQSGGGRGGGGDGEKRA
WRPEVSAILAGQVVGVRRKGDSQVFVQLEDGRGRIECSAFSDAIAEFGHLLTRDRILIVK
GGVREDEFNGGYAMRIRQCWDYEQICTHHAQRLSLRLDLRQRSAWPRIDGLLARHRPGKT
PLRLDLLLQSAQGGIAGMLDLNGSHSVRVDPQLLDALRGDPAVRAVKVKYSPPWAS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgcccatctgcacatccacaccgagttctcgctggcggattcg
accatccgtgtgcccgagaaaccggatcaggccgacccgaagaaagccaagcaggccaac
ctgctcagccgcgcggtggaactggacctgcccgcgctggcggtcaccgacctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgagggcgtgggcatcaagccgatcgcc
ggcgccgacctgctgatcgccgatggcacccaggcgccgtggcggctgaccgtgctgtgc
cgcaatcgcgacggctacctgagcctgtcgcggctgctgacccgcgcctggctggaaggc
caccgcagcgaaggcggcgtggcgctgcgcccggaatggctgcagaccggcagcgacaac
ctgttcgcgctggccggccgcgagagcctggccgggcgcctggccagcgaaggccgccac
gacctggccgagcagcaactggccgactggcagcgcatcttcggcgacggcctgcatctg
gagctgacccgcaccggccgcgacggcgaggaggcgttcaaccagttcgccctgcacgcc
gccggcacccgcggcctgccggtgatcgccagcaacgacgtgcgcttcctgtacgccagc
gatttcgccgcgcacgaggcgcgcgtgtgcatctcctccggccgcgtgctcgacgacccc
aagcgcccgcgcgactacagcgaccagcaatacctgaagtcggccgaggagatggccgcg
ctgttcgccgacatccccgacgcgatcgacaacacgctggcgctggcgcaacgctgcaac
atcgagatgcagttgggcacctacttcctgcccgcctatccggtgcccgacgacgagacg
ctggacagctggattcgcagccagtcgcgcgacggcctggccgcgcgcctggagaagaac
ccgctggcgcccggcaagacccgccaggactacgtggaccggctcgagttcgagctggac
accatcatcaagatgggcttccccggctacttcctgatcgtggccgacttcatccaatgg
ggcaagaaccagggcatcccgatcggcccgggccgcggttccggtgccggctcgctggtg
gcgtgggcgctgcagatcaccgacctggatccgctgccgtacaacctgctgttcgagcgc
ttcctcaacccggaacgcgtgtcgatgcccgacttcgacatcgatttctgcatggatcgc
cgcgacgaggtgatcgactacgtggcgcgcaagtacggccgcgaccgggtcagccagatc
atcacctacggcaccatggcggccaaggcggtggtgcgcgactgcggccgcgtgctcggc
ttcccgtacggcctggtcgacggcgtcgccaagctgatccccaacatcctcggcatcacg
ctgaaggacgcgatgggcgaaggcaaggacagcgagatggcctcgccggagctgatccag
cgctaccaggccgaggacgacgtccgcgacctgatggacctggcgcggcagctcgaggac
ctgacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgccgacgccgctgtcc
gacttctgcccgctgttcgccgaacacgacgtcgacaatctcggcaggaatccggtcacc
cagttcgacaaggacgacgtcgagcaggtcggcctggtcaagttcgacttcctcggcctg
cgcaccctgaccatcatcgactgggcggtgaaggcgatcaacgtgcgccacgcgcgcgcc
ggcatcccgccggtggagatcgccgcgatcccgctcgacgatgcgccgacctacaaaggc
atcttcgcctcgggcaacaccggcgcggtgttccagttcgaatcctcgggcatgcgccgg
ctgctgaaggacgcccgccccgaccgcttcgaggacctcatcgcgctggtgtcgctgtac
cgccccggcccgatggacctgattccctcgttcaacgcgcgcaagcacgggcaggaggag
atcgtctatcccgatccgcgcaccgaagcgatcctgaaggacacctacggcatcatggtg
taccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctgggcggcgcc
gacctgctgcgccgtgcgatgggcaagaaggtgccggcggaaatggccaagcaccgcgag
atcttccgcgagggtgcggccaagggcggcgtcggggaggccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcg
ctggtcagctaccagaccgcgtggctgaaacgccactacccggccgagttcatggcggcc
acgctgtcctcggacatggacaacaccgacaaggtggtcggcttcctcgacgaggtgcgc
aacctcggcctgaccgtgctgccgccgcgcatcaacgcctcggcgtacatgttcgaggcg
gccacgccggacaccatccagtacggcctgggcgcgatcaagggcgtgggccgcggcgcc
tgcgaggcgatcgtggccgagcgcgagcgcggcggcgagtacgcctcgctgctggatttc
tgcacccgcgtggaatcggccaagctcaacaagcgcaccctcgaggcgatgatcaacgcc
ggcgcgatggacgggctgggcgccaaccgcgccacgctgatgctgcagttgccggaggtg
atgaaggccaccgagcagatggcgcgcgagcgcgcctccgggcagaactcgctgttcggc
ggcgccgataccagcgcgccggcgctgcgcctggacctgccggagagcaaggaatggccg
ctgggccagttgctggccggcgagcgcgagacgctgggcttctacctcagcggccatccg
ttcgatccgtaccgcgacgaagtgcgcgagctggtcggctgcgacctgggcgcgctggag
aagatctgcgcccagtccggcggcggccgcggtggcggcggcgacggcgaaaagcgcgcc
tggcgcccggaggtcagcgcgatcctcgccggccaggtggtcggcgtgcgccgcaagggc
gacagccaggtgttcgtgcaactggaggacggccgcggccgcatcgagtgcagcgcgttc
tccgacgccatcgccgaattcggccacctgctgacccgcgaccgcatcctcatcgtcaag
ggcggcgtgcgcgaggacgaattcaacggcggctacgcgatgcggatccgccagtgctgg
gactacgagcagatctgcacgcaccacgcgcagcgcctgtcgctgcgcctggacctgcgc
cagcgcagcgcctggccacgcatcgacggcctgctggcccgccaccgccctggcaagacg
ccgttgcgcctggatctgctgctgcagtcggcgcaaggcggcatcgccggcatgctcgac
ctcaacggcagccattcggtgcgtgtggatccgcaactgctggacgccctgcgcggcgac
ccggcggtgcgtgcggtgaaggtcaagtacagcccgccgtgggcgagttga
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