Xanthomonas hawaiiensis: PG878_08290
Help
Entry
PG878_08290 CDS
T09990
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PG878_08290 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_08290 (uvrB)
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG878_08290 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PG878_08290 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF348
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WNH46427
LinkDB
All DBs
Position
1906541..1908571
Genome browser
AA seq
676 aa
AA seq
DB search
MSDRFQLVSPYSPAGDQPQAIEKLVAGFEAGLAKQTLLGVTGSGKTYTIANVVQAIQKPT
LVMAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLAATKTLLSRRDALVVATVSAIYGLGAPEDYLSLRLILSIGEHVEQRQLIRHLTDLQ
YTRNEYELHRGSFRVRGEVIDVFPAESDSEALRIELFDGDVEQLTLFDPLTGETLRKLQR
YTIYPKTHYATTRERTLSAVDTIKLELKDRLEQLYAQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVVDESHVTVPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLID
PEVEIRPVATQVDDLLSEINLRVADGDRVLVTTLTKRMAENLTEYLGEHGVKVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDETGRRREKQVEYNLEHGIVPKSVARPIVDILEGA
RDDVAEAKSGKGKGKGKARRVAEEPADYRALAPAEIAARLKALEQEMYQHARDLEFEDAA
RVRDQIKKLRDASLVG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgtttccaactcgtatcgccgtattcgccggccggcgaccagccgcaggcg
atcgagaagctggtggccggcttcgaggccggcctggccaagcagaccctgctcggcgtg
accgggtcgggcaagacctacaccatcgccaacgtggtccaggcgatccagaagccgacc
ctggtcatggcgccgaacaagaccctggcggcgcagctgtacggcgagttcaaggcgttc
tttcccaacaacgcggtcgaatacttcgtcagctactacgactactaccagcccgaggcc
tacgtgccgtcctcggacaccttcatcgagaaggacagttcgatcaacgaacacatcgag
cagatgcgcctggccgcgaccaagaccctgctgtcgcggcgcgatgcgctggtggtggcg
acggtctcggcgatctatggcctgggcgcgccggaggactacctgtcgctgcggctgatc
ctgtcgatcggcgagcacgtggagcagcgccagctcatccgccacctgaccgacctgcag
tacacccgcaacgaatacgagctgcaccgcggcagtttccgcgtgcgcggcgaggtgatc
gacgtgttcccggccgaatccgacagcgaggcgctgcgcatcgagctgttcgatggcgac
gtggagcaactgaccctgttcgatccgctgaccggcgaaaccctgcgcaagctgcagcgc
tacaccatctaccccaagacccactacgccaccacccgcgaacgcaccctcagcgcggtg
gacacgatcaagctggagctgaaggaccggctggagcagctgtatgcgcagaacaaactg
gtggaggcgcagcggctggcgcagcgcacccagttcgacctggagatgatggccgaggtc
ggcttctgcaacggcatcgagaactactcgcggcatcttaccggcaaggcgccgggcgag
ccgccgccgaccctgttcgactacctgccgccggatgcattgctggtggtggacgagtcg
cacgtcaccgtgccgcagatcggtgcgatgtacaaaggcgaccgttcgcgcaaggagact
ctggtggaattcggtttccggctgccgtcggcgctggacaaccggccgctgcgcttcgag
gaatgggaggcgcgctcgccgcgcagcatctacgtgtcggccacgccgggtccctacgaa
ttgcgcgaatcggccggcgagatcaccgagctggtggtgcgcccgaccggactgatcgac
ccggaagtcgagatccggccggtggcgacccaggtcgacgatctgttgtcggagatcaac
ctgcgcgtggccgatggcgaccgcgtcctggtcaccacgctgaccaagcgcatggccgaa
aacctcaccgagtacctcggcgagcacggggtgaaggtgcgctacctgcactcggacatc
gatacggtcgagcgcgtggagatcatccgcgacctgcgcctgggcaagttcgacgtgctg
gtcggcatcaacctgctgcgcgagggcctggacatgccagaggtgtcgctggtcgcgatc
ctcgacgccgacaaggagggcttcctgcgttccaccggctcgctgatccagaccatcggt
cgtgccgcgcgcaacctgcgcggcaaggccatcctctatgcggacaagatgacgcgttcg
atgcaggccgcgatcgacgagaccgggcgccgccgcgagaagcaggtggagtacaacctg
gagcatgggatcgttccgaagtcggtggcgcgtccgatcgtggacatcctggaaggtgcg
cgcgacgacgtggccgaggccaagtcgggcaagggcaaaggcaagggcaaggcgcgccgg
gtcgcggaggagccggccgactaccgggcgctggccccggcggagatcgccgcgcggctc
aaggccctggagcaggagatgtaccagcacgcacgcgacctggagttcgaggacgcagcg
cgggtccgcgaccagatcaagaagctgcgcgacgccagcctggtgggctag
DBGET
integrated database retrieval system
