Xanthomonas hawaiiensis: PG878_13170
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Entry
PG878_13170 CDS
T09990
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PG878_13170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xha03000
]
PG878_13170
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_13170
Enzymes [BR:
xha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PG878_13170
Transcription factors [BR:
xha03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PG878_13170
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PG878_13170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
HTH_23
CobS_N
Motif
Other DBs
NCBI-ProteinID:
WNH43476
LinkDB
All DBs
Position
3057309..3058781
Genome browser
AA seq
490 aa
AA seq
DB search
MPALAATDHALYDRARQSRDARFDGVFFTAVRSTGIYCRPVCPAPPPKRSNVRYYPSAAA
AAAAGYRPCLRCRPELSPEAQQQVGEEAVRRALALIAEGALQDASVAALAAELGISARQL
QRLFVAQLGATPAAVHATRRLLLAKQLLTETALPITQVALAAGFNSLRRFNAAFLDGCGM
PPSAIRKQRAESPGGDLVLRLGYRPPLDFLAMLAFLRKRAIPGIERIGEASYERVLGPCE
ASTRIRVEADPQRHELRLHIAAADPRAIPDIVRRVRRVFDLDADLRAVHATLGDDPLLAR
AIARRPGLRVPGGWDGFEVAVRAVLGQQVSVAGAATLAARLVDRHGAARPGQPPGLDRAF
PTPQALRDAPLEAIGLPRSRAATIRALAQAVLDGRLSFRAGQRLDDFVAHAITLPGIGAW
TAHYIALRALGQPDAFPAGDLVLQRMLGEGGARLSERATEARAQAWRPWRAYAVLHLWHL
ANDPPEENRA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccctcgccgccaccgatcacgccctctacgaccgcgcccgccagtcgcgcgat
gcgcgcttcgacggcgtgttcttcactgcggtgcgcagcaccggcatctactgccggccg
gtatgcccggcgccgccgcccaagcgcagcaacgtgcgctattaccccagcgccgcggcc
gcggcggcggccggctaccggccgtgcctgcgctgccgtcccgaactgtcgccggaggcg
cagcaacaggtgggcgaagaggcggtgcggcgggcactggcgctgatcgccgaaggcgcg
ctgcaggacgccagcgtcgccgcgctggccgccgaactgggcatcagcgcgcgccagttg
cagcgcctgttcgtggcccagctcggcgccaccccggcggcggtgcacgccacccggcgc
ctgttgctggccaagcaactgctcaccgagaccgcgctgccgatcacccaggtggcgctg
gcggccggcttcaacagcctgcgccgcttcaatgccgccttcctggacggctgcggcatg
ccgccctcggcgatccgcaagcagcgcgccgagagtcccggcggcgacctggtgctgcgc
ctgggctatcggccgccgctggacttcctggcgatgctggcgttcctgcgcaagcgcgcc
atccccggcatcgagcgcatcggcgaggccagctacgagcgcgtgctcggcccctgcgag
gcctccacgcgcatccgcgtcgaggccgatccgcagcgccacgaactgcgcctgcacatc
gccgcggccgatccgcgcgccattcccgacatcgtgcggcgggtgcgccgcgtgttcgac
ctggatgccgacctgcgcgcggtacacgccacgctcggcgacgatccgctgctggcgcgc
gccatcgcccggcgtcccgggctgcgcgtgcccggcggctgggacgggttcgaagtggcg
gtgcgtgcggtgctcggccagcaggtcagcgtcgcgggtgcggcgaccctggccgcgcgc
ctggtcgatcgccatggcgccgcgcggcccggccaaccgccggggctggaccgcgccttc
ccgaccccgcaggcgctgcgcgatgcgccgctggaagcgatcggcctgccgcgctcgcgg
gcggcgacgatccgtgcgctggcgcaggcggtgctggacggccgtctgtccttccgcgcc
ggccagcgcctggacgacttcgtcgcccacgccatcaccttgcccggcatcggcgcctgg
accgcgcactacatcgcgctgcgcgcgctcggccagcccgacgccttccccgccggcgac
ctggtgctgcaacgcatgctcggcgaaggcggcgcacgcctgagcgaacgcgccaccgag
gcgcgcgcgcaggcctggcgaccctggcgcgcctacgcggtgctgcacctgtggcacctg
gccaacgaccctcccgaggagaaccgcgcatga
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