Xanthomonas hawaiiensis: PG878_13500
Help
Entry
PG878_13500 CDS
T09990
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
xha
Xanthomonas hawaiiensis
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xha03000
]
PG878_13500
Transcription factors [BR:
xha03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PG878_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_23
HTH_Crp_2
HTH_38
Sigma70_r4_2
Crp
AIRS
MarR
HTH_5
TetR_N
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WNH43540
LinkDB
All DBs
Position
complement(3142522..3143529)
Genome browser
AA seq
335 aa
AA seq
DB search
MATTIYDIAKHVGVTAGTVSRALSRPEKVLPATRARIEQAAAALGYVPNTVARTLKTQRS
GKLLVTVPDIANPFFAQILQGAEDAAQAVGYAVLLGDTQHQPDREERYAQMLRRNEADGL
IVLGHRLPPTAREIVKQQGAAAPVVNGCEFDPALGIPSVHIDNAAAAGAVMDHLYGLGHA
RIAVVGGPPDNPLHQQRLEGVRACAKAHRRLRNLTVVPGDFSVASGHAAALALLRGAPAP
TAIFCFSDQMALGALAACRDLGIRVPDDLSIVGFDDLASSSYLTPPLTTIRQPMRDIGVR
AVNLLLAIIERGDVPLQQTLDFSLMVRGSTGAPRG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccatctacgacatcgcaaagcacgtcggcgtcactgcgggcacggtgtcg
cgggcgctgtcccggccggaaaaggtcctgcccgccacgcgcgcgcgcatcgagcaggcc
gccgctgcgctgggctatgtccccaacacggtggccaggacgctcaagacccagcgcagc
ggcaagcttctggtcaccgtcccggacatcgccaatcccttcttcgcgcagatcctccag
ggcgcggaggacgccgcgcaggcggtcggctacgccgtgctgctgggcgatacccagcac
cagcccgatcgcgaggagcgctacgcgcagatgctccggcgcaacgaggccgacggcctg
atcgtgttgggacatcgcttgccgccgacagcgcgcgagatcgtcaagcagcagggcgcc
gcggcgccggtggtcaacggctgcgagttcgacccggcgctgggcattcccagcgtccac
atcgacaacgcagccgccgcgggtgccgtcatggaccacctgtatggactggggcacgcg
cggatcgcggtcgtgggcggcccgcccgacaatcccctgcatcagcaacgactggagggg
gtccgggcctgcgccaaggcgcaccgccgcctgcgcaacctgaccgtcgtgccgggcgac
ttctccgtcgcatccggccatgcggcggcgcttgcgctgctgcgcggtgcgcccgcgccg
accgcgatcttctgcttcagcgatcagatggcgctgggggcgctggcggcctgtcgggac
ctgggcatccgcgtgccggacgacctgtccatcgtcggcttcgacgacctggcgtcgtcc
agttatctcacccccccattgacgacgatcaggcagcccatgcgcgacatcggtgtccgc
gcggtcaacctgctgctcgccatcatcgaacggggggacgtgccgctgcagcagacgctg
gatttcagcttgatggtgcgagggtcgaccggcgcgccgagggggtag
DBGET
integrated database retrieval system
