Xanthomonas hawaiiensis: PG878_13935
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Entry
PG878_13935 CDS
T09990
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG878_13935 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xha03019
]
PG878_13935 (pnp)
03016 Transfer RNA biogenesis [BR:
xha03016
]
PG878_13935 (pnp)
Enzymes [BR:
xha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PG878_13935 (pnp)
Messenger RNA biogenesis [BR:
xha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PG878_13935 (pnp)
Transfer RNA biogenesis [BR:
xha03016
]
Prokaryotic type
tRNA degradation factors
PG878_13935 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
DUF7680
KH_PNO1_2nd
S1_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
WNH43622
LinkDB
All DBs
Position
complement(3254522..3256630)
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFKGPIGAAKVGYKNGEYILNPTVSDLKDSQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHREMQKVINAINELTVEAGTKPSDWVAPSKNDA
MIAALKEAVGEQLAAAFQVRDKLQRRDAIAAIKKDVLAQLAPRATAENWVAADLAKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISVQAGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPTME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGNNFVVLS
DILGDEDHLGDMDFKVAGTADGVSALQMDIKIEGITEEIMKQALAQAKAGRLHILGEMSK
ALTTPRAELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKSRIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVGDKLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGEGASAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctcgaaaccggc
gagatcgcccgccaggccggcggtgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaaggtcaggacttcttcccgctgacggtc
gactatcaggagaagttctacgccggcggccgcatccccggcggcttcttcaagcgcgag
ggccgtgcgaccgagaaggagacgctgatttcgcgtctgatcgaccgtccgatccgtccg
ctgttcccggaggattacaagaacgaagtgcagatcatcgccacggtgatgtcgatgaac
ccggacatcgacggcgacatcgccgcgctgatcggcgcctcggccgccctgtcgctggcc
ggcaccccgttcaagggcccgatcggcgccgccaaggtcggctacaagaatggtgagtac
atcctcaacccgaccgtgtcggacctgaaggattcgcagctggagctggtcgtcgccggt
accgccaacgcggtgctgatggtcgagtccgaagccgcgctgctgtcggaagaagtgatg
ctgggcgcggtcaccttcggccaccgcgagatgcagaaggtcatcaacgcgatcaacgag
ctgaccgtcgaagccggcaccaagccgtccgactgggtcgccccgtccaagaacgacgcc
atgatcgccgcgctgaaggaagccgtcggcgagcagctggccgccgcgttccaggtgcgc
gacaagctgcagcgccgcgacgccatcgccgcgatcaagaaggacgtgctggcgcagttg
gcgccgcgcgccaccgccgagaactgggtcgccgccgacctggccaaggaattcggcgag
ctggaataccagaccatgcgcggttcggtgctgagcaccaaggtgcgcatcgacggccgt
gcgctggacaccgtgcgtccgatcagcgtgcaggccggcgtgctgccgcgtacccacggc
tcggcgctgttcacccgcggcgagacccaggcgatcgtggtcaccacgctgggcaccgcc
cgcgacggccaggtgatcgacgcggtctccggcgagtacaaggaaaacttcctgttccac
tacaacttccctccgtactcggtgggcgagtgcggccgcttcggcgcgcccaagcgccgc
gagatcggccacggccgcctcgccaagcgcggcgtgctggcggtgatgccgaccatggaa
gagttcccgtacaccatccgcgtggtctcggaaatcaccgaatccaacggttcctcgtcg
atggcctcggtctgcggctcgtcgctggcgctgatggacgccggcgtgccggtgaaggcg
ccggtggccggtatcgccatgggcctggtgaaggaaggcaacaacttcgtggtgctgtcg
gacatcctgggcgatgaagatcacctgggcgacatggacttcaaggtcgccggtaccgcc
gacggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggccctggcccaggcgaaggccggccgtctgcacatcctcggcgagatgtccaag
gcgctgaccaccccgcgtgcggagctgagcgactacgcgccgcgcctgctgacgatcaag
atccacccggacaagatccgcgaagtgatcggcaagggcggttcgaccatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcctcg
gtcaacgcgatcgccgcgcaggccgccaagtcgcgcatcgagcagatcacctcggacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggcgcgttcgtg
accatcctgccgggcaaggacggcctggtgcacgtctcgcagatctccagcgagcgcgtg
gagaaggtcggcgacaagctgaaggaaggcgacgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgcatccgcctgtcgatgaaggccgtggaagaaggcgagggcgcgtcg
gccgaataa
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