Xanthomonas hawaiiensis: PG878_13945
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Entry
PG878_13945 CDS
T09990
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xha
Xanthomonas hawaiiensis
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xha03016
]
PG878_13945 (truB)
Enzymes [BR:
xha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PG878_13945 (truB)
Transfer RNA biogenesis [BR:
xha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PG878_13945 (truB)
Prokaryotic type
PG878_13945 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WNH43624
LinkDB
All DBs
Position
complement(3257260..3258186)
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AA seq
308 aa
AA seq
DB search
MPVFGPRLPRIVFRRLDGIVLLDKPIGMSSNAALQAARRLFRAEKGGHTGSLDPLATGLL
PLCFGEATKLAGLLLGSAKAYEAEVVLGVTTDSDDAEGAVLRTRPVPPLDAAALEAALAP
LRGRIRQRAPIYSALKQGGEPLYLKARRGEAIEAPEREVEVHAIDVLAHAGDRLRLHVTC
GSGTYIRSLARDLGEALGCGAHIAALRRLWVEPFRNPQMVTLEHLQHLAAQDPAALEALV
LPLAAGLADFPPVRLEPAAAQRFRMGQRLRDPAWAPGLAAVFDADGVPLGLGQVDASGLL
APQRMFNP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttcggcccgcgcctgccccgtatcgtcttccgtcgcctcgacggcatcgtg
ctgctggacaagccgatcggcatgagttccaacgcggcgctgcaggcggcgcggcggctg
ttccgtgcggagaagggcggtcacaccggcagcctggatccgctcgcgaccggcctgctg
ccgctgtgtttcggcgaggcgaccaagttggccgggttgctgctcggctcggccaaggcc
tacgaagcggaggtcgtgctcggcgtcaccaccgacagcgacgatgccgagggcgcggtg
ctgcgcacccgcccggtgccgccgctggacgcggccgccctggaggcggcgctggcaccg
ctgcgcgggcgcatccgccagcgcgcgccgatctactccgcactcaagcagggcggcgag
ccgctgtacctcaaggcgcgccgcggcgaggcgatcgaagcacccgagcgcgaggtcgag
gtgcatgcgatcgacgtgctcgcccatgccggcgaccgcctgcgcctgcacgtgacctgc
gggtccggcacctacatccgcagcctggcccgcgacctgggcgaggcgttgggctgcggt
gcgcatatcgccgcgctgcggcggctgtgggtggaaccgttccgcaacccgcagatggtc
accctggagcacctgcagcacctggccgcgcaggatccggcggcgctggaggcgctggtg
ctgccgctggccgccggcctggccgatttcccgccggtgcgcctggagcctgctgcggcg
cagcgtttccgcatgggccagcgcctgcgcgatcctgcctgggcgcccggcctggccgcg
gtgttcgacgccgacggcgtcccgctgggcctgggtcaggtcgatgcgagcgggctgctg
gcgccgcagcgcatgttcaatccgtga
DBGET
integrated database retrieval system
