Xanthomonas hawaiiensis: PG878_14175
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Entry
PG878_14175 CDS
T09990
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xha
Xanthomonas hawaiiensis
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xha03009
]
PG878_14175 (rimO)
Enzymes [BR:
xha01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PG878_14175 (rimO)
Ribosome biogenesis [BR:
xha03009
]
Prokaryotic type
ribosomal protein modification factors
PG878_14175 (rimO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CSD2
YajR_YAM
PrmA
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WNH43666
LinkDB
All DBs
Position
complement(3307464..3308852)
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AA seq
462 aa
AA seq
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MSLATPKVGFVSLGCPKALVDSERILTQLRVEGYAIVPSYDAADVVVVNTCGFIDSAVAE
SMEAIGEAMAENGKVIVTGCLGKRSEQIRAAYPDVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLLPRARGAEDDIGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLR
EAERLVKGGVRELLVVSQDTSAYGVDLKYAEREWRGRSYQTRMKALCEGLSDLGAWARLH
YVYPYPHVDDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVERTLERVQRWRALCP
EITLRSTFIVGFPGETGAEFEQLLEFLDAAQLDRVGAFAYSPVEGASANALPDPVPEAVK
QERLARFMEKQAAISAARLEAKIGSVQECLVDLLEDGIAVARSKADAPEIDGLVHIQNGG
ELGLKPGDLVQVEITDSDEHDLFGDALPAQASSARPLDLRVL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgcgacccccaaagtcggcttcgtcagcctcggctgcccgaaggcccttgtc
gattccgaacgcatcctcacccagttgcgcgtggagggctatgcgatcgtgcccagctac
gacgcggccgacgtggtggtggtcaacacctgcggcttcatcgattcggcggtggccgag
tcgatggaggcgatcggcgaggccatggccgagaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgttcggagcagatccgcgcggcctacccggacgtgctggcggtgtccggt
ccgcaggactaccagagcgtgatggaagcggtgcatgcggcgctgccgccgcggcacgat
ccgttcgtggacctgttgccgcgcgcgcggggcgccgaagacgacatcggggtcaagctg
accccgcgccactacgcctacctgaagatttccgaaggctgcaatcaccgctgcagcttc
tgcatcattccgtcgatgcgcggcgacctggtgtcgcggccggtcgacgaggtgctgcgc
gaggccgagcgtctggtgaagggcggggtgcgcgagttgctggtggtgtcgcaggacacc
tcggcctatggcgtggacctgaagtacgccgagcgcgagtggcgcggccgcagctaccag
acgcggatgaaggcgctgtgcgagggtctgtcggacctgggcgcatgggcacgcctgcat
tacgtgtatccgtacccgcacgtggacgacgtgatcccgctgatggccgagggcaagctg
ctgccgtacctggacatcccgttccagcacgccagcccgcgcatcctcaagctgatgaag
cggccgggcgcggtggaacgcaccctggagcgcgtgcagcgctggcgcgcgctgtgcccg
gagatcaccctgcgttcgaccttcatcgtcggcttccccggcgagaccggcgccgagttc
gagcagttgctggaattcctggacgccgcgcagctcgaccgcgtcggtgccttcgcctac
tcgccggtggaaggcgccagcgccaacgcgctgccggatccggtgccggaagcggtcaag
caggagcggctggcgcgcttcatggaaaagcaggcggcgatttccgccgcgcgcctggaa
gccaagatcggcagcgtgcaggagtgcctggtcgacctgctggaggatggcatcgcagtg
gcgcgctccaaggccgatgcgccggagatcgacggcctggtgcatatccagaacggcggc
gagcttgggctgaagccgggcgacctggtgcaggtcgaaatcaccgacagcgacgagcac
gacctgttcggcgatgcattgccggcacaggcatcgtcggcaaggccgctggatctgcgc
gtactctga
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