Xanthomonas hawaiiensis: PG878_14415
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Entry
PG878_14415 CDS
T09990
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03030
DNA replication
xha03430
Mismatch repair
xha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG878_14415 (holA)
03430 Mismatch repair
PG878_14415 (holA)
03440 Homologous recombination
PG878_14415 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xha03032
]
PG878_14415 (holA)
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_14415 (holA)
Enzymes [BR:
xha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG878_14415 (holA)
DNA replication proteins [BR:
xha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG878_14415 (holA)
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG878_14415 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
WNH43712
LinkDB
All DBs
Position
complement(3370908..3371942)
Genome browser
AA seq
344 aa
AA seq
DB search
MELRPEQLATQPASQPLQPVYLIAGPETLRVLEAADAVRARARAAGIGEREVFDADGRDF
DWGQLYSSFNAPSLFSAQRLIELRLPSGKPGKEGGEVITAFCADPPPDVVLLITCNEWSK
AHQGKWADAVARIGTIAVAWAIKPHELGDWIERRLRSKGLRADAGAVQRLAERVEGNLLA
AAQEIDKLALLADGQGLDVAAMESLVADAARYDVFRLAEATLAGQAPAVRRMLAGLRAEG
EAVAALLPILIKELLRTAALAKVQAAGGNLAAEMKGQGIWESRQAPFKRALQRHAEPRRW
ERFAAEAGRIDRIAKGRADGDAWIALERLLLAIAEARAVRLLVV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgtcccgaacaactcgccacccagccggcgtcgcagccgctgcagccggtc
tacctgatcgccggtccggaaaccctgcgcgtgctcgaagccgccgacgcggtccgcgcc
cgcgcgcgcgccgccggcatcggcgagcgcgaggtattcgacgccgacggccgcgacttc
gactggggccagctgtactccagcttcaacgcgcccagcctgttcagcgcgcaacggctg
atcgaactgcgcctgcccagcggcaagcccggcaaggagggtggcgaggtcatcactgcg
ttctgcgccgacccgccgccggacgtggtgctgctgatcacctgcaacgaatggagcaag
gcgcaccagggcaagtgggccgacgcggtcgcgcgcatcggcaccatcgccgtggcctgg
gcgatcaagccgcacgaactgggcgactggatcgagcggcgcctgcgcagcaagggcctg
cgcgccgatgccggcgcggtgcagcgcctggccgagcgggtggaaggcaacctgctggcg
gcggcgcaggagatcgacaagctggccttgctggccgacggccagggcctggacgtggcg
gcgatggagtcgctggtcgccgacgccgcccgctacgacgtgttccgactggccgaggcg
accctcgccggacaggcgccggcggtgcggcgcatgctcgccggcctgcgtgccgagggc
gaggcggtggccgcgctgttgccgattctgatcaaggagctgctgcgcacggccgcactg
gccaaggtgcaggccgccggcggcaacctggccgcggagatgaaggggcagggcatctgg
gagtcgcggcaggccccgttcaagcgcgccctgcagcgccacgccgaaccgcgccgctgg
gaacgcttcgccgccgaggccggccgcatcgaccgcatcgccaagggccgcgccgacggc
gacgcctggatcgccctggagcgcctgctgctggcgatcgccgaggcgcgggcggtgcgg
ttgttggtggtatga
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