KEGG   Xanthomonas hawaiiensis: PG878_14800
Entry
PG878_14800       CDS       T09990                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xha  Xanthomonas hawaiiensis
Brite
KEGG Orthology (KO) [BR:xha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xha03400]
    PG878_14800
Enzymes [BR:xha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PG878_14800
    5.6.2.6  RNA 3'-5' helicase
     PG878_14800
DNA repair and recombination proteins [BR:xha03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PG878_14800
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C Cas3-like_C_2
Other DBs
NCBI-ProteinID: WNH43786
LinkDB
Position
3455082..3457628
AA seq 848 aa
MSAAAVRRRPADAPLYAWFARQGWQPLPFQRALWGHYLDGGSGLLHTPTGSGKTLAAFGG
PLLEGLRAQAAAQAAAAKKKPAPGKGANATAKTVSPPRTRRQAQRDLKVLWITPLRALAA
DTVRALREPAQALGLDWQIGLRTGDASARDKRLARSGKLDVLVTTPESLALLLSYPDTAP
QLATLRCVIVDEWHELLGNKRGVLLQLCLARLRGWAPTLRTWGLSATLGNLDEARDVLLP
HLPQAPIVAGVKPRTLTLETLAPAVGERFPWAGHLGLAQLPRVLEKLFAVRTSLLFTNTR
AQAELWHQALTSVWPEEAHTLALHHGSLDPALRSAAEQGLRDGSLRCVVATSSLDLGVDF
PAVDQVLQIGSPKGVARLLQRAGRAKHRPGEAGHVLCVPSHALELVEYAAARRAIAHGRI
ESRPSPRLSLDVLAQHCITCALGGGFAADALYAEVRGTAAFAALDAPTWQAVLEFVVQGG
RALAQYPDYRKVVLDADGLYRVHDRRIALRHRLSIGTITSDGSVAVRFLRGGRLGAVEEQ
FVGRLRRGDRFQFAGRLLELVRLEDMTAYVRLAKGGDGSVPKWMGGRMPLSSELGREVEA
VFADPRGEAELRALAPLLGLQRALSNLPAPQRLLAERVRARDGQHLFVYPFAGRQVHEGL
AALLALRWGRRQRNTFSFAANDYGLVLSPAEDAPIDATLLRALLSPAQLFEDLRESLNLG
ELARRQFREIARVAGLLPPSLPGRLPRSLRQLQASSGLLYDVLSRFDPEHLLLAQAEREV
LQGEMELTRLAATLDDCAARELALHSPRSLTPLAFPLWAESIRGQLSTEDWKARVMRAAA
QLEQRHAR
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgagcgcagccgcagtgcgtcggcgcccggccgatgcgccgctgtacgcctggttcgcg
cggcagggctggcaaccgctgccgttccagcgcgcgctgtgggggcattacctggacggc
ggctccggtctgctgcatacgcccaccggcagcggcaagaccctggctgcattcggcggc
ccgttgttggagggcctgcgtgcgcaggccgcggcacaggcggccgcagcaaaaaagaag
cccgcccccggcaagggcgcaaacgcgaccgccaagaccgtatcgccgccgcgcacgcgc
cggcaggcgcaacgcgacctcaaggtgctgtggatcacccccttgcgcgcgctcgccgcc
gacaccgtacgtgcgctgcgcgaaccggcgcaggcgctgggcctggactggcagatcggc
ctgcgcaccggcgacgccagcgcccgcgacaagcgcctggcgcgcagcggcaagctcgac
gtgctggtgacgacgcccgaatcgctggcgctgctgctgtcctaccccgacaccgcgccg
caactggcgacgttgcgctgcgtgatcgtcgacgagtggcacgaactgctcggcaacaag
cgcggcgtgctgctgcagctgtgcctggcgcggctgcgcggctgggcgccgacgctgcgc
acctggggcctgtcggccacgctcggcaacctggacgaagcgcgcgacgtgctgctgccg
cacctgccgcaggcgccgatcgtggccggggtcaagccgcgcacgctgaccctggagacg
ctggcacccgcggtcggcgagcgcttcccctgggccgggcatcttggcctggcgcaattg
ccaagggtgctggaaaaactcttcgcggtgcgcaccagcctgctgttcaccaacacccgc
gcgcaggccgagctgtggcaccaggcgctgacctcggtgtggccggaagaggcgcacacg
ctggcgctgcaccacggctcgctggacccggcgctgcgcagcgccgccgagcaaggcctg
cgcgacggcagcctgcgttgcgtggtggcgacctcgagcctggacctgggcgtggatttt
ccggccgtcgaccaggtgctgcagatcggcagccccaagggcgtggcgcggctgctgcaa
cgcgccggccgcgccaagcaccgccccggcgaggccggccacgtgctgtgcgtgccctcg
cacgcgctggaactggtcgagtacgccgccgcgcgccgcgccatcgcccatggccgcatc
gaatcgcggccgtcgccgcggttgtcgctggacgtgctggcacagcactgcatcacctgc
gcactgggcggcggcttcgctgccgacgcgctgtacgccgaagtgcgcggcaccgccgcc
ttcgccgcgctggatgcgccgacctggcaggcggtgctggagttcgtcgtgcagggcgga
cgcgcgctggcgcaataccctgactaccgcaaggtggtgctggacgcggacggcctgtac
cgcgtgcacgaccgccgcatcgccctgcgccatcgcttgtcgatcggcaccatcaccagc
gacggcagcgtcgcggtgcgcttcctgcgcggcggccggctcggcgcggtggaggaacag
ttcgtcggccgcctgcgccgcggcgaccgcttccagttcgccgggcgcctgctggaactg
gtgcggctggaggacatgaccgcctacgtgcgcctggccaagggcggcgacggcagcgtg
ccgaaatggatgggcgggcgcatgccgctgtcctcggaactgggccgcgaagtggaagcg
gtgttcgccgatccgcgcggcgaggccgagctgcgcgcgctggcgccgctgctcggcctg
cagcgcgcgctgtcgaacctgccggcgccgcagcggctgctggccgagcgcgtgcgcgcc
cgcgacggccagcacctgttcgtgtatccgttcgccggccgccaggtgcacgaaggcctg
gccgcgctgctggcgctgcgctggggtcggcggcagcgcaacaccttcagcttcgccgca
aacgactacggcctggtgctgtcgccggcggaggacgcgccgatcgatgcgacgctgctg
cgcgcgctgctgagtccggcgcagttgttcgaggatctgcgcgagagcctcaacctgggc
gaactggcgcggcgccagttccgcgagatcgcccgcgtcgccggcctgctaccgcccagc
ctgcccggccgcctgccgcgcagcctgcgccaactgcaggcgtccagcggcctgctgtac
gacgtgctgagccgcttcgatcccgaacacctgctgctggcgcaggccgagcgcgaggtg
ctgcagggcgagatggaactgacccggctcgccgccaccctggacgactgcgccgcgcgc
gagctggcgctgcacagcccgcgcagcctcacgccactggcgttcccgctgtgggccgag
agcatccgcggccagctcagcaccgaggactggaaggcgcgggtgatgcgcgcggcggca
caactggagcagcgccatgcgcgctga

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