Xanthomonas hawaiiensis: PG878_15015
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Entry
PG878_15015 CDS
T09990
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03420
Nucleotide excision repair
xha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PG878_15015
03430 Mismatch repair
PG878_15015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_15015
Enzymes [BR:
xha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG878_15015
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG878_15015
MMR (mismatch excision repair)
Other MMR factors
PG878_15015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
PhoH
UvrD_C_2
DEAD
AAA_16
NACHT
SLFN-g3_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WNH43822
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All DBs
Position
3515363..3517066
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AA seq
567 aa
AA seq
DB search
MAIVLCDQRLRLLATEGHIAVRGGAGSGKTTIALAKACEDLRAGRLGRTGKALFVSFARA
TVARVAEQATASLPRDQLARIEINTYHGFAWSILRSHAYLLGTRPGVSLLLPAHERSRLA
GVLEENRARELRRLFEEEGLVAFDLFPILLAELLDLLPVVARAIGDAYPVIILDEFQDTN
AEEWAMIACLGRRSTLIALGDPKQRIYDFKGADPRRFDDFIEAFDPTTFDFQSENNRSAG
TDIALFADALVSGNYRAEPYVGVSVVRYGGQSLHPLKERVLRTAGRYRRRPEWSIAVLVP
TNKLAVNVFDYMRREANGLPSYPVDIAVSMEGPMLAGMIIALLLEPRVPNHSLGADVLDA
MALLETGRKERASATAIETARKLLDRAARVRQRGETGYGQAVGAGVRQLVADVEELALSG
DPFSDWLSIRNLMTGNARKEIQAVATEARHMRLLRRGTQIETRLAEAWRAHGSYLNAREL
LRAALVEDQFAASSRTQQGVIVMTIHKAKGKEFDEVVVFEDLYNRYLRNHGADSERSARF
NLHVAATRARSAVAIMTPSRDPCRLLP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggccattgttctttgcgatcaacggctgcgccttctcgcaacagaagggcatatcgcg
gtgcgaggtggagccggctcgggcaaaaccaccatcgcacttgcaaaggcatgcgaagac
ttgagggctggccgactgggacgcacgggcaaggccctgttcgtcagcttcgcccgcgcc
actgtggcgcgggttgctgagcaggcgaccgcatcattgccgcgcgatcaactggctcga
atcgagatcaatacttaccacggctttgcatggtcgatcctaagaagccacgcctatctg
ctaggcactcgcccgggtgtatcgctacttcttccagctcacgagcgatctcgtctagcg
ggcgtgttggaagaaaaccgcgcacgcgagctgcgacgcttgttcgaagaagaaggtcta
gtagcctttgatctttttccaatcctcctagctgagctgctcgacttgctacccgtagtc
gctcgcgccattggtgacgcctatccggtgatcatcctcgacgaatttcaggacacgaac
gccgaggaatgggcaatgattgcctgccttggacgccgtagcactttgatcgcgctcggg
gatccaaagcaacgcatttatgatttcaaaggcgccgacccaaggcggttcgatgacttc
atcgaagctttcgacccaacgacctttgactttcaaagcgagaacaaccgcagcgcagga
acagacattgcgctattcgctgatgcacttgtaagcgggaactaccgagctgaaccctat
gttggagtctccgttgtgcgttatggcggccaaagtctccacccgctgaaagagcgagtt
cttcgcactgcgggcagatatcgccgtcgccctgaatggtcaatcgcggtgcttgtgccc
accaacaagctcgcagtgaacgtctttgattacatgagaagggaggccaatggtctgccg
agctatccggttgatatcgcagtgtcgatggaaggaccaatgcttgcgggcatgatcatc
gccttactgttggagccaagagttccgaaccactctctcggcgcggacgttctagacgcc
atggctttgttggaaaccggacgcaaggaacgggcgtccgccacggcaatcgaaacagct
cgcaagctcctcgaccgagctgcacgagtccgccaacgcggcgaaaccggttacggccaa
gcggttggagccggcgtgcgccaattggtcgctgatgtagaagaattagcactaagtgga
gatccgttctctgactggctgtccattcgtaacctgatgacaggcaacgccaggaaagag
attcaggcagtagccacagaggcacgacacatgaggctattgcgccgtggaacgcagatc
gagactcgtctggcggaggcctggcgcgctcacggttcttatctcaatgcgagagagctg
ctgcgcgctgctcttgtggaggaccaattcgccgctagctcgcgaacacaacagggggtt
atcgtcatgacgatccacaaggcgaagggaaaagagttcgatgaggtggttgtatttgag
gacctatacaatcgataccttcgcaatcatggggctgactcagagcggtccgcacgtttc
aatttgcatgttgctgccacccgtgcacgctcggccgttgcaatcatgacgccatcgagg
gacccctgccgtctgctgccttaa
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