Xanthomonas hawaiiensis: PG878_16675
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Entry
PG878_16675 CDS
T09990
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
xha
Xanthomonas hawaiiensis
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xha03000
]
PG878_16675
Transcription factors [BR:
xha03000
]
Prokaryotic type
Helix-turn-helix
Other families
PG878_16675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
HTH_30
AAA_5
AAA_2
PAS_4
HTH_7
HTH_23
HTH_28
MCM
HTH_17
AAA
HTH_50
PAS
HTH_22
HTH_20
HTH_AraC
nSTAND6
Mga
Motif
Other DBs
NCBI-ProteinID:
WNH44135
LinkDB
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Position
3922170..3924152
Genome browser
AA seq
660 aa
AA seq
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MSESTVASLAQAKVVAPSAADADCAPLARMRHFRQIESLPPVLARSWRRCLDEYGLDPDT
HPSPMVHDDGELRERQQRLEALLRIAKVEMENLYEQIAGGSYAVVFADTEATVLHSVQDP
ALLRAFRETGLFCGASWAERYQGTNGIGTCAMEGSALSVHRGEHYLERHLPLSCSGAPIL
DPQGRLLAVLDASTPDARDTKLVQCHTGALVRMSAAQIARAYFLEQYRHAWILRFHSRPE
FAGLLHEALIAVGGDGRVLAVNEATLEQLGKPDRSPLVGRDIAQVMQLDFDTLEQRARND
ASTLWSIRCACHGRRFFALAQPPRARPPASRARAGGADAQAARANDHVGSDPRMLHNLDN
ALKLAKHRVSILLCGATGTGKEEFAKAVHRSSPWADRPFVAVNCAAIPEALIESELFGYA
RGAFTDAAREGRHGKLLQASGGTLFLDEIGDMPLPLQTRLLRVLEEQSVTPLGSDRAVPL
ELHVISASHRDLAQMVGNGGFREDLYYRLNGVVLHLPPLRERSDKAELIRTLLREESGEQ
PVRISEDALHKLLSYAWPGNLRQLRNVLRTAAVLCADGVIRIPNLPQEIVDADSGPCLLG
DDAHAGDGVPGRVALDSAERSVLQQQLERHRWNVSRTADALGISRNTLYRKLRKHGLATV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcgactgtcgccagcctcgcgcaagccaaggtcgtcgcaccatccgccgcc
gatgccgactgcgcgccgctggcgcgcatgcgccatttccgccagatcgagtcgttgccg
ccggtcctggcgcgctcgtggcggcgctgcctcgacgagtacggcctggacccggacacc
catccctcgccgatggtccacgacgacggcgaactgcgcgagcgccagcagcggctggag
gcgctgctgcgcatcgccaaggtggagatggaaaatctctacgaacagatcgccggcggc
agctacgcggtggtgttcgccgacaccgaggccacggtgttgcacagcgtgcaggatccg
gcgctgctgcgcgcgttccgcgagaccgggctgttctgcggcgccagctgggccgagcgc
tatcagggcaccaacggcatcggcacctgcgcgatggagggcagcgcgctgagcgtgcac
cgcggcgagcactacctggagcggcacctgccgttgtcgtgcagcggcgcgccgatcctg
gatccgcaaggccgcctgctggcggtgctggatgcttccacgcccgacgcgcgcgatacc
aagctggtgcaatgccataccggcgcgctggtgcgtatgtcggcggcgcagatcgcccgc
gcgtacttcctggaacagtaccggcatgcctggatcctgcgcttccacagccgtccggag
ttcgccgggctgctgcacgaggcgttgatcgcggtgggcggcgacggccgcgtactggcg
gtcaacgaggcgacgctggaacagctcggcaagcccgaccgttccccgctggtcgggcgc
gatatcgcccaggtgatgcaactggatttcgacacgctggagcagcgcgcgcgcaacgac
gccagcacgctgtggtcgatccgctgcgcctgccacgggcgccgcttcttcgccctggcg
cagccgccgcgcgcgcgcccgcccgccagccgtgcccgcgccggcggcgcggatgcccag
gccgcgcgcgccaacgaccatgtcggctccgatccgcgcatgctgcacaatctcgacaat
gcgctgaagctggccaagcaccgtgtgtcgatcctgctgtgcggcgccaccggcaccggc
aaggaagagttcgccaaggcggtgcaccgcagctcgccctgggccgaccggccgttcgtg
gcggtgaactgcgcggcgatcccggaggcgctgatcgagagcgaactgttcggctatgcg
cgcggcgccttcaccgatgccgcgcgcgagggacgccacggcaagctgctgcaggccagc
ggcggcaccctgtttctggacgagatcggcgacatgccgctgccgctgcagacgcgcctg
ctgcgcgtgctggaggaacagagcgtgactccgctgggcagcgaccgcgcggtgccgctg
gaactgcacgtgatcagcgccagccaccgcgacctggcgcagatggtcggcaacggcggc
ttccgcgaggacctgtactaccgcctcaacggcgtggtgctgcacctgccgccgctgcgc
gagcgcagcgacaaggccgaactgatccgcaccctgctgcgcgaggagagcggcgagcag
ccggtgcgcatcagcgaggacgccctgcacaagctgctcagctatgcctggcccggcaac
ctgcggcagttgcgcaacgtgctgcgcaccgcggcggtgctgtgcgccgacggcgtcatc
cgcatccccaacctgccgcaggaaatcgtcgacgccgacagcggcccgtgcctgctcggc
gacgatgcgcacgccggcgacggcgtgcccggccgcgtcgccctggacagcgccgagcgc
agcgtgctgcagcagcagctcgagcgccaccgctggaacgtcagccgcaccgccgatgcg
ctgggcatcagtcgcaataccttgtatcgcaagctgcgcaagcatgggttggcgacggtt
tga
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