Xanthomonas hawaiiensis: PG878_20155
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Entry
PG878_20155 CDS
T09990
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xha
Xanthomonas hawaiiensis
Pathway
xha03420
Nucleotide excision repair
xha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PG878_20155 (uvrD)
03430 Mismatch repair
PG878_20155 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xha03400
]
PG878_20155 (uvrD)
Enzymes [BR:
xha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG878_20155 (uvrD)
DNA repair and recombination proteins [BR:
xha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG878_20155 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PG878_20155 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
nSTAND_NTPase5
InPase
Motif
Other DBs
NCBI-ProteinID:
WNH44787
LinkDB
All DBs
Position
complement(4715941..4718142)
Genome browser
AA seq
733 aa
AA seq
DB search
MDVSHLLDDLNPAQREAVSAAPGHYLVLAGAGSGKTRVLTHRIAWLHQVHGVPVHGILAV
TFTNKAAGEMRHRADLQLRNGSRGMWIGTFHGLAHRLLRLHWQDAKLPESFQVLDSDDQL
RLVKRVVQQLELDEGKFPPKQIVWWINQQKDEGRRAQHIQPEPRDEWVTTLRNAYALYQE
RCDRAGLVDFAELLLRAHELLRDTPALLAHYRARFGEILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQRFLTDFPSAQTIRLEQNYRSSANILNAANAVIAH
NPDRIGKQLWTDSGDGEPIDLYAAYNEVDEARYVVERVRQWVRDGGSYSEAAVLYRSNAQ
SRAFEEALIAEQVPYRVYGGMRFFERAEIKDTLAYLRLVANRADDAAFERAVNTPARGIG
DRTLDEVRRLARAQSLSLWAAAQQAAQQGGDLAARARNALGQFLGLIEQLALDVAGLPLP
EQIDQVLARSTLREHWSKESRGGLDSESRTDNLDELVSVASRFVRADGDEDADEGRQAMT
ELVAFLAYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLAGMEDGLFPSARSLEES
GRLEEERRLAYVGITRARHKLVLSYAESRRIHGQDNYNVPSRFLREIPRELLHEVRPKVQ
VSRSASLGAPRSLGHSVIEAPAIKLGANVQHPKFGGGVVIDYEGSGAHARVQVQFDEAGA
KWLVMAYANLTVL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctcccatttgctcgacgatctgaaccccgcccagcgcgaggccgtttccgct
gcgcccggccactacctggtcctggccggcgccggctccggcaagacgcgcgtgctcacc
catcgcatcgcctggttgcaccaggtgcatggcgttccggtgcacggcattctggcggtc
accttcaccaacaaggccgcgggcgagatgcgccaccgcgccgacctgcagttgcgcaac
ggcagccgcggcatgtggatcggcaccttccacggcctggcgcaccgcctgctgcgcctg
cactggcaggacgccaagctgccggaaagcttccaggtgctcgattcggacgatcagctg
cggctggtcaagcgcgtggtgcagcaactggagctggacgagggcaagttcccgcccaag
cagatcgtgtggtggatcaaccagcagaaggacgagggccgccgcgcgcagcacatccag
ccggagccgcgcgacgagtgggtgaccaccctgcgcaacgcctacgcgctgtaccaggaa
cgctgcgaccgcgccggcctggtcgacttcgccgaactgctgctgcgcgcgcacgaattg
ctgcgcgacaccccggcgttgctggcgcactaccgcgcccgcttcggcgagatcctggtc
gacgagttccaggacaccaacgccatccagtacgcattcgtgcgcgtgctcgccggcgac
agcggccacgtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctcaccgatttccccagcgcgcagaccatccgcctg
gagcagaactaccgctccagtgccaacatcctcaacgccgccaacgcggtgatcgcgcac
aaccccgaccgcatcggcaagcagctgtggaccgactcgggcgacggcgagccgatcgac
ctgtacgcggcctacaacgaggtggacgaggcgcgctacgtggtcgagcgcgtgcgccaa
tgggtacgcgacggcggcagctacagcgaggcggcggtgctctaccgcagtaatgcgcag
tcgcgcgcgttcgaagaggcgctgatcgccgaacaggtgccgtaccgggtctatggcggc
atgcgcttcttcgagcgcgccgaaatcaaggacaccctggcctacctgcgcctggtcgcc
aaccgcgccgacgatgcggcgttcgagcgtgcggtgaacacgccggcgcgcggcatcggc
gaccgcaccctcgacgaggtgcggcgcctggcgcgcgcgcagtcgctgtcgctgtgggcg
gcggcacaacaggccgcgcagcagggcggcgacctggccgcacgcgcgcgcaatgcgctg
ggccagttcctcggcctgatcgagcaactggccttggacgtggccgggctgccgctgccc
gaacagatcgaccaggtactggcgcgctccaccctgcgcgagcactggagcaaggagagc
cgcggcgggctggattcggagtcgcgtaccgacaacctcgacgaactggtgtcggtggcc
tcgcgcttcgtccgcgccgacggcgacgaggacgcggacgaaggccgccaggcgatgacc
gaactggtcgcgttcctggcctatgcctcgctggaggccggcgaaggccaggcccaggcc
ggcgaggagggcgtgcaactgatgaccctgcactcggccaagggtctggaattcccgatc
gtgttcctggccggcatggaagacggcctgttccccagcgcgcgttcgctggaggagagc
gggcgcctggaggaagagcggcgcctggcctacgtcggcatcacccgcgcccgccacaag
ctggtgctgagctatgccgaatcgcggcgcatccacggccaggacaactacaacgtgccc
tcgcgcttcctgcgcgagatcccgcgcgagctgctgcacgaagtgcggccgaaggtgcag
gtgtcgcgcagcgcctcgctgggcgcgccgcgaagcctggggcacagcgtgatcgaggcc
ccggcgatcaagctcggtgccaacgtgcagcatcccaagttcggcggcggcgtggtcatc
gactacgaaggcagcggtgcgcacgcccgcgtgcaggtgcagttcgacgaggccggcgcc
aagtggctggtgatggcgtacgccaatctgacggtgttgtga
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