Xanthomonas hydrangeae: LMG31886_00360
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Entry
LMG31886_00360 CDS
T07925
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhd03032
]
LMG31886_00360
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_00360
Enzymes [BR:
xhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LMG31886_00360
DNA replication proteins [BR:
xhd03032
]
Prokaryotic type
DNA Topoisomerases
LMG31886_00360
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LMG31886_00360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
CAD7719644
LinkDB
All DBs
Position
LMG31886:44880..46091
Genome browser
AA seq
403 aa
AA seq
DB search
MKAKRVLRNAAATASAAGKLASVAASAVAATAAAASVAAVAQAKATARAAGLTYVNDQQP
GISRRRAGKSFSYRSADGQRVADADTLQRIRALAIPPAYTEVWICAKPNGHLQATGRDAR
RRKQYRYHAEWAQVRGEGKFERVIAFGQALPKLRRRLRRDLVLPGFPREKVLAIVVALLA
DTLVRVGNAEYARSNRSYGLTTLRNRHMEFLRGGRARLKFRGKSGQDHEIEVDDKQLVKL
IRQCQQLPGQSLFQYRDDDGQLQPVDSGEVNDYLREAMGEDFTAKDFRTWGGTLAALQRL
ARLPLPERMSERALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGELQAMATG
VRGERQWEAATLRFLTDSRSKQRKPSSKPRKAVGPRLRRAKSA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaaacgtgttcttcgcaatgccgcagccaccgccagcgctgccggcaagctg
gccagcgtggccgccagtgcggtggctgccaccgctgcggcggcgagcgtggcagcggtc
gcacaggccaaggccaccgcgcgtgcggccgggctcacctatgtcaacgatcaacagccc
ggcatcagccgccgcagggccggcaagagcttcagttatcgcagtgccgacgggcagcgc
gtagccgatgccgataccttgcaacgcatccgcgcactggccattccgccggcgtatacc
gaggtatggatctgcgccaagcccaacggccatctgcaggccaccggccgcgatgcgcgc
aggcgcaagcaataccgctatcacgccgagtgggcgcaggtgcgtggcgaaggcaagttc
gaacgggtgatcgccttcggccaggccttgcccaaattacgccgccggctgcgccgcgat
ctggtattgccgggatttccgcgcgagaaggtgctggcgatcgtggtggcgttgctggcc
gacaccctggtacgcgtgggcaatgccgaatacgcgcgcagcaatcgttcctatggcctg
accaccttgcgcaaccggcatatggaatttctgcgcggcggacgtgcgcggctgaagttc
cgcggcaagagcggccaggatcacgagatcgaagtggacgacaagcagctggtcaagctg
atccggcaatgccagcaattgccggggcaatcgttgtttcagtaccgcgacgacgatggc
cagctgcagccagtggattcgggtgaggtcaacgactatctgcgcgaggcgatgggcgag
gatttcaccgccaaggatttccgcacctggggcggtacgctggcggcactgcaacgtctg
gcacgcctgccgctgcccgagcgcatgagcgaacgcgcgctgacccaggtacagaacgat
gtcatccgcgaagtggccgatgcgctgggcaacacgccctctgtgtgtcgcaaggcctac
atcgacccgtgcgtgttcgaaggctggcgcgccggcgaattgcaggccatggccaccggc
gtgcgtggcgagcgccaatgggaggcggccacgctgcgctttctgaccgactcgcgcagc
aagcaacgcaagccgagcagcaaacctcgcaaggcggtcgggccgcgcctgcgtcgtgca
aaatctgcgtga
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