Xanthomonas hydrangeae: LMG31886_05650
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Entry
LMG31886_05650 CDS
T07925
Symbol
clp
Name
(GenBank) CRP-like protein Clp
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd02020
Two-component system
xhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMG31886_05650 (clp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMG31886_05650 (clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhd03000
]
LMG31886_05650 (clp)
Transcription factors [BR:
xhd03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LMG31886_05650 (clp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Crp
HTH_Crp_2
HVO_A0261_N
HTH_28
SgrR_N
HTH_11
MarR
GntR
Motif
Other DBs
NCBI-ProteinID:
CAD7723776
LinkDB
All DBs
Position
LMG31886:complement(676167..676859)
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AA seq
230 aa
AA seq
DB search
MSPGNTTVVTTTVRNATPYLALDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVVS
GSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEISYERLQQ
LFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSH
PQGTQLRVSRQELARLVGCSREMAGRVLKKLQADGLLHARGKTVVLYGTR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagcccaggaaacacgacggttgtcaccacgacggtacgtaacgccaccccttatctg
gcactggacgctggcacgattgagcgttttctggcgcacagccaccgcaggcgctatccg
acccggaccgatgtgttccggccaggagacccggccggcaccctctactacgttgtcagc
ggttcggtcagcatcatcgccgaggaagatgacgatcgtgagttggtgctgggctacttc
ggcagtggcgagttcgtcggcgagatggggttgttcatcgaatccgatacgcgcgaggtg
atcttgcgcacccgcacccaatgcgaactggccgaaatcagctacgagcggttgcagcaa
ctgttccagaccagtctgtcaccggatgcgccacgcatcctgtacgcgattggcgttcag
ctctcaaagcgattgctcgataccacaaggaaagccagtcgcctggcattcctggacgtg
accgatcgcatcgtgcgtacgctgcacgatctgtccaaggaacctgaagcgatgagccat
ccgcagggcacccagctgcgcgtttcgcggcaggagttggcacgccttgtcggttgctcg
cgcgaaatggccggccgcgtgctcaagaaactgcaagccgatggtctgttgcatgcgcgc
ggcaagaccgtcgtgctgtacggcacgcgctaa
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