Xanthomonas hydrangeae: LMG31886_06250
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Entry
LMG31886_06250 CDS
T07925
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMG31886_06250 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhd03019
]
LMG31886_06250 (groL)
03110 Chaperones and folding catalysts [BR:
xhd03110
]
LMG31886_06250 (groL)
03029 Mitochondrial biogenesis [BR:
xhd03029
]
LMG31886_06250 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhd04147
]
LMG31886_06250 (groL)
Enzymes [BR:
xhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LMG31886_06250 (groL)
Messenger RNA biogenesis [BR:
xhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LMG31886_06250 (groL)
Chaperones and folding catalysts [BR:
xhd03110
]
Heat shock proteins
HSP60 / Chaperonin
LMG31886_06250 (groL)
Mitochondrial biogenesis [BR:
xhd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LMG31886_06250 (groL)
Exosome [BR:
xhd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LMG31886_06250 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LMG31886_06250 (groL)
Exosomal proteins of breast cancer cells
LMG31886_06250 (groL)
Exosomal proteins of colorectal cancer cells
LMG31886_06250 (groL)
Exosomal proteins of bladder cancer cells
LMG31886_06250 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
CAD7724244
LinkDB
All DBs
Position
LMG31886:740003..741646
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DQAVKAAVIELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLALEKATIKDLGRAKKVQVSKENTTIIDGAGDSATIEARVGQIKTQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALVAVGNLTGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGTGNYGYNA
ANGEFGDMVEFGILDPTKVTRSALQNAASIAGLMITTEAMVADAPKKDEPAMPGGGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacattcgtttcggtgaagacgcacgtacccgcatggtccgtggcgtc
aacgttctcgccaatgccgtcaaggcaaccctgggcccgaagggccgcaacgtcgtgctc
gaaaagagcttcggcgcgccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggctgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
accaacgacaacgccggcgacggcaccaccaccgccaccgtgctggcacaggccctgatc
cgcgaaggcgccaaggccgtggctgccggcatgaacccgatggacctcaagcgcggtatc
gaccaagccgtcaaggccgccgtcatcgagctgaagaacatctccaagcccaccaccgac
gacaaggcgatcgcccaggtcggcaccatctcggccaactcggacgaatcgatcggcaac
atcattgccgaagcgatgcagaaggtcggcaaggaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgagctggacgtggtcgagggcatgcagttcgatcgcggctacctg
tccccgtacttcatcaacaaccagcagagccagtcggccgacctggacgacccgttcatc
ctgctgcacgacaagaagatctccaacgtgcgcgacctgctgccagtgctggaaggcgtg
gccaaggccggcaagccgctgctgatcgtggctgaagaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgtggcatcgtcaaggtcgtggccgtcaaggcaccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtgggtctggcgcttgagaaggcgaccatcaaggacctgggccgtgcc
aagaaggtgcaggtctccaaggagaacaccaccatcatcgacggcgccggcgattcggcc
acgatcgaagcccgcgttggccagatcaagacccagatcgaggacacctcgtccgattac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgttgcagtgatcaag
gtcggcgcttcgaccgaaatcgaaatgaaggaaaagaaggcccgcgttgaagacgccctg
cacgccacccgtgcagccgtcgaagaaggcgtggtcccgggcggcggtgtggccctggtg
cgtgcgctggtggccgtcggtaacctgaccggtgccaacgaagaccagacccacggcatc
cagatcgccctgcgcgccatggaagccccgctgcgcgaaatcgtggccaatgccggcgaa
gagccgtccgtgatcctgaacaaggtcaaggaaggcaccggcaactacggttacaacgcg
gccaacggcgagttcggcgacatggtcgagttcggcatcctggacccgaccaaggtcacc
cgttcggcgctgcagaacgcagcctcgatcgccggcctgatgatcaccaccgaagccatg
gtggccgatgccccgaagaaggacgagccggcaatgcccggcggcggtggcggcatgggc
ggcatgggcggtatggatttctga
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integrated database retrieval system
