Xanthomonas hydrangeae: LMG31886_07460
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Entry
LMG31886_07460 CDS
T07925
Symbol
dcsC
Name
(GenBank) O-ureido-serine racemase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00300
Lysine biosynthesis
xhd00470
D-Amino acid metabolism
xhd01100
Metabolic pathways
xhd01110
Biosynthesis of secondary metabolites
xhd01120
Microbial metabolism in diverse environments
xhd01230
Biosynthesis of amino acids
Module
xhd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMG31886_07460 (dcsC)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMG31886_07460 (dcsC)
Enzymes [BR:
xhd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LMG31886_07460 (dcsC)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAD7725205
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All DBs
Position
LMG31886:897155..898006
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AA seq
283 aa
AA seq
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MNADGRSERLRFTKMHGAGNDFVVLDLRDGTPPPDAALAARLADRHFGVGCDQILTIETP
RSSEAVAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGDDFVIDSPFTAHRVQRLHA
GTYAVAMGVPHFEPTQIPLAGFAHAREEYALPVHGETVRFGAVSMGNPHAVIEVGRVDAA
PVERVGALLQQNAAFPDSVNVGFVQVVEPTHVRLRVFERGVGETLACGSGACAAAVVLMQ
RGRVERDVRVSLPGGELRIRWAGDQQEVVMSGPAVFVFDGEWN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgacggtcgcagcgagcgtctgcgtttcaccaaaatgcatggcgccggcaac
gatttcgtggtgctggacctgcgcgacggcacgccaccgccggatgccgcgctggccgcc
cgcctggccgaccgccacttcggcgtgggctgcgaccagatcctgaccatcgaaacgcca
cgcagcagcgaggcggtcgccgcctacggcatctggaactcggacggctcggccgcgcgc
caatgcggcaacggcgcgcgctgtgtcgccgcctggttggtgcgcgatggcacggcgcag
ggcgatgatttcgtcatcgacagcccgttcaccgcgcaccgcgtgcagcgtctgcacgcc
ggcacctatgcggtggcgatgggcgtgccgcacttcgagcccacgcagatccccttggcc
ggctttgcacatgcgcgtgaggaatacgcgctgccggtgcatggcgagaccgtgcgcttt
ggcgcggtgtcgatgggcaacccgcacgccgtgatcgaggtggggcgtgtggatgcggcg
ccggtggagcgcgttggggcgttgttgcagcagaatgccgccttccccgattcggtaaac
gttggtttcgtccaagtcgtcgagcccacgcatgtgcgcctgcgcgtgttcgagcgcggc
gtcggcgaaaccctggcctgcggcagtggcgcgtgcgcagcggccgtggtgctgatgcag
cgcggccgtgtggaacgcgatgtgcgggtgtccttgcctggtggcgagctgcgcatccgc
tgggccggcgatcagcaggaagtggtgatgtccggcccggccgttttcgtgttcgatgga
gagtggaactga
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