Xanthomonas hydrangeae: LMG31886_08660
Help
Entry
LMG31886_08660 CDS
T07925
Name
(GenBank) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LMG31886_08660
Enzymes [BR:
xhd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
LMG31886_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
Motif
Other DBs
NCBI-ProteinID:
CAD7726139
LinkDB
All DBs
Position
LMG31886:complement(1047346..1048953)
Genome browser
AA seq
535 aa
AA seq
DB search
MPRPTLRILACALLFYASVSAPAMAAFGVTRSGDRFIVDTGAQLVFSVNASNGDIVSMRY
RDNELQTTESKGTQLASGLGSASVEARTVGGAIVVSAKAGDLTQYYIARTGRNAIYMATY
APTLSKVGGEELRFVTRLNVAKLPNAQQEPDSNVGTPVESEDVFLLPDGRTSSKFYSARR
MIDDKVHGVSGSGVAAFMLMGNRERSSGGPFFKDIATQKTRVTHELYNYMYSDHTQTEAF
RGGFHGVYGLLFTDGGAPSSAQLDTSFVDASLGLSGYLADAGRGAVSGRVSGVLSGQPAV
VGLRSDQAQYWATANGSGDYQLAGVRPGRYRLTLYQNELEVAQRDVEVFANATAQAALQA
VALAGTPKWQIGIADGTPAGFRYADLLPRAHPSDKRMSWAPVTYTVGSSSVSSFPAVQWR
SINTPNRIDFTLAANAVRGYRLRIFVSLSQVSARPQISVNARWNGPIQATPNQPKTRGIT
RGTTRGNNTLYEVDIPASALQAGSNRIEIGVASGSPDDGFLSPAFVFDSIQLVAM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccctaccctgcgcatcctggcatgcgcactgttgttctacgcaagcgtcagc
gcacctgccatggctgccttcggcgtcacccgcagcggtgatcgcttcatcgtggatacc
ggcgcccaactggtgttctcggtcaacgccagcaatggcgacatcgtgtcaatgcgttat
cgcgacaacgagttgcagaccaccgagtccaagggcacgcagctggcctcggggctgggt
agcgccagcgtggaggcgcgcacggtgggtggggcgatcgtggtctcggccaaggccggc
gacctgacccagtactacattgcacgcacaggccgcaacgcgatctacatggcaacctat
gcaccgacactgtcgaaggtcggcggcgaagagctgcgcttcgtcacccgcttgaatgtc
gccaaactgccgaatgcacagcaggaacccgattccaacgtcggcacgccggtcgagagc
gaggatgtgttcttgctgccggatggacgcaccagttccaagttctactcggcacgccgc
atgatcgacgacaaggtgcatggggtcagcggttcgggggttgcggcgttcatgctgatg
ggcaatcgcgagcgcagttcgggcggaccgtttttcaaggacatcgccacgcaaaaaacc
cgcgtgacgcatgagctctacaactacatgtattccgaccacacccagaccgaggcgttt
cgcggcggtttccacggcgtgtacgggctgctgttcaccgatggcggtgcgccctccagc
gcgcaactggacaccagctttgtcgatgccagtctgggcctgagcggttatctcgccgat
gccgggcgcggtgcggtgagcggccgtgtcagcggcgtgttgtccggccagcccgccgtg
gtcggcctgcgcagcgaccaggcgcagtactgggccacggccaatggcagcggcgactac
cagcttgccggcgtgcgcccgggacgctatcgcctgacgctctaccagaacgaactggaa
gtggcccaacgcgatgtcgaagtgtttgccaatgcgacggcgcaagccgcgctacaggca
gtggcattggcgggcacgccgaagtggcagatcggcattgccgatggcacgcccgccggt
ttccggtatgcggatctgttgccgcgcgcgcatccctccgacaaacgcatgagctgggca
ccggtcacctacaccgttggctccagcagtgtgagcagctttccggcggtgcagtggcgc
agcatcaacacgccgaaccgcatcgacttcaccctggcggccaatgcagtgcgtggctat
cgcctgcgcatcttcgtatcactgagccaggtcagcgcgcgtccgcagatcagcgtcaat
gcgcgctggaatggaccgatacaggccacacccaaccaacccaagacgcgcggcatcacc
cgtggcaccacgcgcggtaacaacacgctatacgaggtggacattcctgcctcggcgctg
caggccggcagcaaccgcatcgaaatcggcgttgcctccggatcgccggacgatggcttc
ctcagcccggcattcgtgttcgacagcatccagctggtggcgatgtaa
DBGET
integrated database retrieval system
