Xanthomonas hydrangeae: LMG31886_09270
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Entry
LMG31886_09270 CDS
T07925
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00730
Thiamine metabolism
xhd01100
Metabolic pathways
xhd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LMG31886_09270 (thiC)
Enzymes [BR:
xhd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LMG31886_09270 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CAD7726602
LinkDB
All DBs
Position
LMG31886:1132329..1134206
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AA seq
625 aa
AA seq
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MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVQGSRADLQVPMREIALTRTPTLFGGEDNA
PLSVYDTSGPYTDPHAAIDLAAGLAPLRARWIAERGDTVALNDLSSSFGRGREHDARLDA
VRFPARHLPRVAREGANVTQMHYARRGIITPEMEFVAIRENQRLEAVTDAMLRKQHPGEA
FGAAIQQRITPEFVRDEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSILAKWCLAHHKE
NFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTKLAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
DDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGMGEA
HALSAGMEEKSAQFLAQGAQVYRAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcgcccaccgttttgcagcaacaagcccagtcgctgtccgaggctgtgacc
cagccgattcccgggtcccgcaagatcttcgtgcagggctcgcgcgccgacctgcaggta
ccgatgcgcgagatcgcattgacccgcacaccgaccttgttcggtggcgaagacaacgcg
ccgctcagtgtctacgacacctccggtccgtataccgacccgcacgccgcgatcgatctt
gccgccggcctggcgccgctacgcgcgcgctggatcgccgaacgcggcgataccgtggcg
ctgaatgacctgagttccagcttcgggcgcggccgtgagcacgatgcgcgcctggatgca
gtgcgctttcctgcgcggcacttgccgcgggtggcgcgcgaaggtgccaatgtcacccag
atgcactacgcacggcgcggcatcatcaccccggagatggagttcgtggccattcgcgag
aaccagcgtctggaggcggtgactgacgcgatgctgcgcaagcagcatccaggcgaagcc
ttcggtgcggcgatccagcagcgcatcacgccggaattcgtgcgcgacgaaatcgcccgt
ggtcgcgcgatcctgcccaacaacatcaatcacccggaaagcgagccgatgatcatcggt
cgcaatttcctgaccaagatcaacgccaacatcggcaatagcgcggtgtcttcgggcatt
gccgaagaagtggagaaactggtgtggtcgatccgctggggcggcgacacggtgatggac
ctgtccaccggcaagcacatccatgaaacgcgcgagtggatcatccgcaactcgccggtg
ccgatcggcacggtgccgatctatcaggcgctggaaaaggtcgacgggcgcgccgaagaa
ctcacctgggagatctttcgcgacaccttgatcgagcaggccgaacaaggcgtggattac
ttcaccatccacgccggtgtgctgttgcgctacgtgccgctcacggccaagcgtgtcacc
ggtatcgtctcgcgcggtgggtcgatcctggccaagtggtgcctggcccatcacaaggaa
aactttctttacacccacttcgaagacatctgccagatcatgaaggcgtatgacgtggcg
ttttcgctgggcgatggcttgcgcccgggctgcattgccgatgccaacgatgcggcgcag
ttcggcgagctggaaacgctgggcgagctgaccaaactggcgtggaagcacgacgtgcag
accatgatcgaagggcctgggcatgtgccgatgcagctgatcaaggagaacatggacaag
cagttgcgcgaatgcggcgaagcgccgttctacaccctggggccgttgaccaccgacatc
gcgcccggctacgaccacatcaccagcgcgatcggcgcggcgatgatcggctggttcggc
accgcgatgctctgctatgtcacgcccaaggagcatctgggcctgcccaaccgccaggac
gtgcgcgacggcatcatggcctacaagatcgccgcgcatgcggccgacctggccaagggg
catccgggtgcgcaggtgcgcgacaacgcgttgagcaaggcgcggttcgagttccgttgg
gacgatcagttccacctcgggctggatccggaaaaggccaaggagttccatgacgagacc
ttgcccaaggacgcgcacaagctggcgcatttctgttcgatgtgcggcccgcacttctgt
tcgatgaagatcacccaggacgtgcgcgattacgcggccgagcatggcatgggcgaagcg
catgccttgtctgctggaatggaagagaagtcggcgcagtttctcgcgcaaggcgcgcag
gtgtatcgcgcgtcgtga
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