Xanthomonas hydrangeae: LMG31886_11290
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Entry
LMG31886_11290 CDS
T07925
Symbol
atoC
Name
(GenBank) Regulatory protein AtoC
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMG31886_11290 (atoC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xhd02022
]
LMG31886_11290 (atoC)
02035 Bacterial motility proteins [BR:
xhd02035
]
LMG31886_11290 (atoC)
Two-component system [BR:
xhd02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LMG31886_11290 (atoC)
Bacterial motility proteins [BR:
xhd02035
]
Pilus system
Twitching motility proteins
LMG31886_11290 (atoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_22
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CAD7728142
LinkDB
All DBs
Position
LMG31886:complement(1373112..1374506)
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AA seq
464 aa
AA seq
DB search
MSEPKNALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLANNPYDLCLTDMRLPD
GNGIELVTEISKQYPQTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDIGVLRGLVKHAL
ELNNRDRPAPPAPPPEQASRLLGDSGAMEGLRATIGKVARSQAPVYIVGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSVRPVGASSESLVDVRILSATHKNLGDLVSDGRFRHDLYY
RINVIELRVPPLRERSGDLPQLAAAIIARLAHSHARPIPLLTQSALDAMDHYGFPGNVRE
LENILERALALAEDDQISASDLRLPAHGGHRLAASPGSAAIEPREAVVDIDPASAALPSY
IEQLERAAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccaaaaatgccttggttgtcgatgacgagcgtgatatccgcgagttgctt
gttctcaccctgggccggatgggcctgcgcatcagcaccgcggccaacctggccgaagcg
cgcgagctgctggccaacaacccctacgacctctgcctgaccgacatgcgcctgccagac
ggcaacggcatcgaactggtcaccgaaatctcaaaacagtatccgcagaccccggtggcg
atgatcaccgcgttcggcagcatggacctggcggtggaagcgctaaaggctggcgccttc
gacttcgtcagcaagccggtggacatcggcgtgctgcgcggcctggtcaagcacgcgctg
gaattgaacaaccgcgaccgccccgccccaccggcgccgccaccggaacaggccagccgc
ctgctcggcgactccggtgcgatggaaggcctgcgcgccaccatcggcaaggtcgcgcgc
agccaggcgccggtctatatcgtcggcgaatcgggcgtgggcaaggagctggtcgcacgc
accatccatgagcagggcgcacgcgcggccggcccgttcgtgccggtcaactgcggcgca
attcccgccgaactgatggaaagcgaattcttcggccacaagaagggcagcttcaccggc
gcgcatgccgacaagcccgggctgttccaggccgcgcatggcggcacgctgttcctggac
gaagtggccgaattgccgctgcagatgcaggtcaagctgctgcgcgcgatccaggaaaaa
tcggtgcgcccggtcggcgcctccagcgagtcgctggtggacgtacgcatcctctcggcc
acccacaagaacctcggcgacctggtctccgacggtcgttttcgtcacgacctgtactac
cgcatcaacgtgatcgaactgcgcgtcccgccactgcgcgaacgcagcggcgacctgccg
caactggccgccgccatcatcgcgcgcctggcgcacagccacgcccgcccgattccgctg
ctgacccaatccgcgctcgacgcgatggaccactacggcttccccggcaacgtgcgcgag
ctggaaaacatcctcgaacgcgcccttgccctggccgaagacgaccagatcagcgccagc
gacctgcgcctgcccgcccacggcggccaccgcctcgccgccagccccggcagcgccgcc
atcgaaccgcgcgaagccgtcgtcgacatcgaccccgcctcggccgccctgccctcctac
atcgagcaactcgagcgcgccgcgatccagaaagcgctggaagaaaaccgctggaacaag
accagaaccgccgcgcagctaggcatcacgtttcgtgcgcttcgctacaagctcaagaag
ttggggatggagtga
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