Xanthomonas hydrangeae: LMG31886_11720
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Entry
LMG31886_11720 CDS
T07925
Symbol
sbnH
Name
(GenBank) 2-[(L-alanin-3-ylcarbamoyl)methyl]-2-hydroxybutanedioate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00300
Lysine biosynthesis
xhd00470
D-Amino acid metabolism
xhd01100
Metabolic pathways
xhd01110
Biosynthesis of secondary metabolites
xhd01120
Microbial metabolism in diverse environments
xhd01230
Biosynthesis of amino acids
Module
xhd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMG31886_11720 (sbnH)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMG31886_11720 (sbnH)
Enzymes [BR:
xhd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LMG31886_11720 (sbnH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NACHT_N
Motif
Other DBs
NCBI-ProteinID:
CAD7728481
LinkDB
All DBs
Position
LMG31886:complement(1427579..1428808)
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AA seq
409 aa
AA seq
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MSLRIDTAAVMEALPHLREHSDGPICAYVYDLAALHAHAAWMRAQLPAECELFYAAKANA
EPPILRTLAPHMDGFEAASGGELAWLHRQQPQAALLFGGPGKLDSELAQAAALPDCTVHV
ESLGELERLAATAAQAGRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPDDLDAAIHR
LRASPSLRLDGFHFHLMSHQRDAGAQLHLIAAYLHTVQQWRQRYGLGPLRVNAGGGFGVD
YLAPECSFDWAGFCAGLPALLSEHGDALRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWF
AIARGGTHHFRTPAAQGHDHPFSVLRGARAPVLRDMPVTLVGQLCTPKDVLARDQPIAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFFPALTDLSLSPREAKT
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcatcgataccgccgcagtgatggaagcgttgccacacctgcgcgaacac
agcgatggcccgatctgcgcctacgtctacgacctggccgcactgcacgcgcatgcggca
tggatgcgcgcgcaattgccggccgagtgcgagctgttctatgcggcaaaagccaatgcg
gagccgccgatcctgcgcacgctcgccccgcacatggatggcttcgaggcggcctccggt
ggcgaactggcctggctgcatcggcaacaaccgcaggccgcgttgttgttcggcggaccc
ggcaagctcgatagcgaacttgcccaggccgccgcgctgcccgactgcaccgtacatgtg
gaaagccttggcgagctggaacgcctggccgccactgcagcgcaggccggccgctgcgtg
ccggtgttcctgcgcatgaacatcgccgtgcccggcgcgcagagcacgcgtctgatgatg
ggcgggcagccctcgccgttcggcctggacccggacgatctggatgcggcgatccatcgg
ctgcgtgcgagcccctcgctgcggctggatggcttccatttccatctgatgtcgcaccag
cgcgatgccggcgcacagctgcacctgatcgccgcctatctgcacaccgtgcagcagtgg
cggcaacgctacgggctcggcccgttgcgggtgaatgcaggcggtggcttcggtgtggat
tatctggcgccggaatgctcgttcgattgggccggcttctgcgccggcttgcccgcgttg
ctaagcgaacatggcgacgcactgcgtctgcggttggagccggggcgctatgtcagtgcc
agctgcggctggtatctgatggaagtgctggacctcaagcgcagccacggcgcctggttt
gcgatcgcccgcggcggcacccatcacttccgcacccccgccgcgcaaggccacgatcac
ccgttcagtgtgttgcgtggcgcgcgcgcgcccgtgctgcgcgacatgccggtgacgctg
gtcgggcagctgtgcacgcccaaggacgtgctggcgcgcgaccagcctatcgcggcactg
gcgccgggcgactgcctggccttcccgctggctggcgcgtatgcgtggaatatttcgcac
cagcagttcctgatgcacccaccgccgcagatggtgttttttccagcattaactgattta
tcgctcagtccgcgagaggcgaagacttag
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