Xanthomonas hydrangeae: LMG31886_12380
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Entry
LMG31886_12380 CDS
T07925
Symbol
mrcB
Name
(GenBank) Penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00550
Peptidoglycan biosynthesis
xhd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LMG31886_12380 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xhd01003
]
LMG31886_12380 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xhd01011
]
LMG31886_12380 (mrcB)
Enzymes [BR:
xhd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LMG31886_12380 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LMG31886_12380 (mrcB)
Glycosyltransferases [BR:
xhd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LMG31886_12380 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xhd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LMG31886_12380 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CAD7729010
LinkDB
All DBs
Position
LMG31886:1514368..1516815
Genome browser
AA seq
815 aa
AA seq
DB search
MPRRHDDHDAPDDFEDDTNEQGSRWQRRLIVWAFAAFALALGFLIPYTVYLNKQVTQRFG
ELRWQIPTRVYGRPLVLVPGDALDAATLKTELDAASYRDDGQAKLAGTYQQDGSRFTIAS
RGYIDVDGRVPAKRVEVSLSGGRVASLRDAGDRKALKSARLDPARIATLYGQKQEERRLV
RMEEVPELLVTGLQAVEDRDFNSHHGIDLSGMVRAAWIMARSGGQVRQGASTLTQQLARS
GLLGIGKEQTVTRKFNEILYAVIMEARYDKRTILEAYLNQVYLGQRGGQAIHGVSSGAEL
WFGRELNSMTTEQIALLIGLVKGPSYYDPRRNPERALDRRNFVLGKLHENNLIDAAEYKR
ALAEPLGVPKEPGLVAANRFPAYVDLVRRQLAHDYPEGVLQGAGMSVLTGMSPSAQAYAE
GAVTGTIKRLDNKKRPPLQAGLVLTDVHNGDVLAVVGSRDVAKPGFNRAVEAQRQVGSLL
KPFVYLLALASPDRWALSSWVDDAPVAVQLSRGKTWSPGNSDNRSHGTVRLIDALAHSYN
QATVRVGMQVGPERIAQLIQVLAGIKADTNPSLILGATDQSPYGMAQLYQFLAAGGEIQP
LHAVRGVLDPQGKLLKRYDKTPAPAQEGDSVAANLISIALQQVVSGGTARQLLGDGLGRL
SPAGKTGTSNDGRDSWYAGYTGDHLAVIWMGNDQNEQTGLYGATGAMRVWSSIFARLPSA
PLKVSGKGLDWQWVDAAGTGVTDPGCPGARQFPFVVGFTPAYAPCAGNAPSIEGAPGDPA
APAEQSGGGGWRRFFGLDKKPEEPAQAPASPPPAH
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgacgccacgacgaccacgacgctcccgacgatttcgaggacgacaccaacgag
caaggctcccgctggcaacgcaggctgattgtctgggcctttgcggcattcgcgctggcg
cttggttttctgattccctacacggtgtatctgaacaagcaggtcacccagcgtttcggc
gagctgcgttggcagatcccgacccgcgtgtacgggcggccgttggtgctggtgcccggc
gatgcgctggatgcagccaccttgaagaccgagctggatgcagcctcgtaccgtgacgac
gggcaagccaagctggccggcacctaccagcaggacggcagtcgcttcaccatcgccagc
cgcggctatatcgatgtggacgggcgcgtgcccgcgaagcgcgtggaagtcagcctctcc
ggtgggcgtgtggccagcctgcgcgatgccggcgaccgcaaggcgctgaaaagcgcgcgt
ctggatccggcgcgcatcgccacgctgtacgggcagaagcaggaagagcgccgcctggtg
cgcatggaagaagtgcctgagctgctggtcaccggcctgcaggcggtcgaggaccgcgac
ttcaacagccaccacggcatcgatctcagcggcatggtgcgtgcggcctggatcatggcg
cgctccggcggccaggtgcgccagggcgccagcaccttgacccagcagctggcacgcagc
ggcctgctcggtatcggcaaggaacagacggttacccgcaagttcaacgaaatcctgtac
gcggtgatcatggaggcgcgttacgacaagcgcaccatcctggaggcctatctcaatcag
gtgtatctggggcagcgcggcgggcaggcgatccatggcgtgtcctcgggcgcggagctg
tggttcggccgcgaactcaactcgatgaccaccgaacagatcgccttgctgatcgggctg
gtcaaggggccgtcctactacgacccgcgacgcaacccggaacgggcgctggatcgacgc
aatttcgtgctgggcaaactgcacgaaaacaacctgatcgacgcggccgaatacaagcgc
gcactggccgagccgttgggcgtgcccaaggagcccggtctggtcgccgccaaccgcttc
ccggcctatgtggatctggtgcggcgccagctggcgcacgattacccggaaggcgtgctg
caaggcgccggcatgagcgtgctcaccggcatgtcgccgtccgcgcaggcgtacgccgaa
ggcgcagtgaccggcaccatcaagcggctggacaacaagaagcgcccgccgctgcaggcc
ggcctggtgctcaccgacgtgcataacggcgacgtgctggcggtggtcggcagccgcgat
gtggccaaacccggcttcaatcgcgccgtcgaagcgcagcggcaggtcggctcgttgctc
aagccgttcgtgtatttgctggcattggcctcgccggatcgctgggcgctgtccagctgg
gtcgacgatgcgccggtggcggtgcagctcagccgtggcaagacctggtcgccgggcaac
tccgacaaccgcagtcacggcacggtgcggctgatcgatgcgctggcgcattcctacaac
caggccacggtacgcgtgggcatgcaggtcggcccggagcgcatcgcgcaactgatccag
gtgctggctggcatcaaggccgacaccaatccctcgctgatcctcggtgccaccgatcag
agcccgtacggcatggcgcagctgtatcagttcctggccgccgggggcgagatccagccg
ctgcatgcggtgcgcggtgtgctcgatccgcagggcaagctgctcaagcgctacgacaag
accccggcgccggcgcaggagggcgattcggtggctgccaacctgatcagcatcgccctg
cagcaggtggtcagcggcggtaccgcacggcagttgctgggcgatggcctggggcggctg
tcgccggccggcaagaccggtacttccaacgacggccgcgacagctggtatgccggctat
accggcgaccatctggcggtgatctggatgggcaacgaccagaacgagcagaccggcctg
tacggcgccaccggcgcgatgcgggtgtggtctagcatcttcgcgcggctgccgagtgcg
ccgttgaaggtcagcggcaagggcctggactggcagtgggtggatgcggccggcaccggc
gtgaccgaccccggctgcccgggcgcgcgccagttcccgttcgtggtcgggttcacgccg
gcctacgccccgtgtgccggcaatgcaccgtcgatcgaaggcgcgcccggcgatcctgca
gcacctgccgaacaatccggcgggggtggctggcgccgcttcttcggtctggacaaaaag
ccggaagaacccgcacaagcgcctgcctcgcccccgcccgcgcattga
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