Xanthomonas hydrangeae: LMG31886_13700
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Entry
LMG31886_13700 CDS
T07925
Symbol
pel2
Name
(GenBank) Pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00040
Pentose and glucuronate interconversions
xhd01100
Metabolic pathways
xhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LMG31886_13700 (pel2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMG31886_13700 (pel2)
Enzymes [BR:
xhd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LMG31886_13700 (pel2)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CAD7730015
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All DBs
Position
LMG31886:1679742..1680803
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AA seq
353 aa
AA seq
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MIIKTRNGALALALSACAASAIAGPVGYGAATTGGGNKTPVNVATFEAMQAAIDSYSGSG
GLVLNYTGKFDFSTIKDVCAQWKLPARTVQIKNKSDVTIKGANGSAANFGVWVVGNANNI
IIQNMTIGLLQGGEDADSISLEGNSSGSPSRIWVDHNTVFASLTKCSGAGDASFDGGIDM
KKGVHHVTVSYNHVYNYQKVALNGFSDSDTKNSAARTTYHHNRFENVESRVPLQRRGLSH
IYNNYFNNVTTSGINVRMGGVAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITW
GTPDGSKPYANATNWITTKVFPEPLGYTYSITPAAQVKAKVIATAGAGKNLAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaagacacgcaatggcgcactcgcgcttgcactgtccgcttgcgctgcgagt
gccatcgccggcccggtcgggtacggtgccgccaccaccggcggcggcaacaagaccccg
gtcaacgtcgccacgttcgaagcgatgcaggccgccatcgacagttattccggcagtggc
gggctggtgctcaactacaccggcaagttcgacttcagcaccatcaaggacgtctgcgcg
cagtggaagctgccggccaggacggtgcagatcaagaacaagagcgacgtcaccatcaag
ggcgcgaacggctcggccgccaacttcggtgtgtgggtggtgggcaacgccaacaacatc
atcatccagaatatgaccatcggcctgctgcagggcggcgaagacgccgattcgatttcg
ctggaaggcaattccagtggttcgccgtccaggatctgggtcgaccacaacaccgtgttc
gcttcattgaccaagtgctccggcgccggcgatgcctccttcgacggcggcatcgatatg
aagaagggcgtgcaccacgtcaccgtgtcctacaaccacgtctacaactaccagaaggtc
gcgctcaacggattcagcgacagcgacaccaagaactcggccgcgcgcaccacctatcac
cacaaccgcttcgagaacgtcgagtcgcgcgtgccgttgcagcgtcgcgggctgagccac
atctacaacaactacttcaacaacgtcaccacctcgggcatcaatgtgcgcatgggcggc
gtggcgaagatcgaatccaactacttcgagaacatcaagaacccggtgacttcgcgcgac
agcagcgagatcggctactgggacctgatcaacaactacgtcggtagcggcatcacctgg
ggcacgccggacggcagcaagccctacgccaacgccaccaactggatcaccaccaaggtg
ttcccggaaccgctgggctacacctacagcatcaccccggccgcgcaggtcaaggccaag
gtgatcgccactgcgggtgccggcaagaacctggcggaatga
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