Xanthomonas hydrangeae: LMG31886_15570
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Entry
LMG31886_15570 CDS
T07925
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03030
DNA replication
xhd03430
Mismatch repair
xhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMG31886_15570 (holA)
03430 Mismatch repair
LMG31886_15570 (holA)
03440 Homologous recombination
LMG31886_15570 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhd03032
]
LMG31886_15570 (holA)
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_15570 (holA)
Enzymes [BR:
xhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMG31886_15570 (holA)
DNA replication proteins [BR:
xhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMG31886_15570 (holA)
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMG31886_15570 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
CAD7731455
LinkDB
All DBs
Position
LMG31886:1885610..1886638
Genome browser
AA seq
342 aa
AA seq
DB search
MELRPEQLAGQSNQPLQPVYLIAGPETLRVLEAADAVRARARAEGISEREVFDADGREFD
WNQLDATFNAPSLFSPRRLVEIRLPSGKPGKDGADVITRFCANPPPDVVLLITANDWSKA
HQGKWADAVGRIGTISVAWAIKPHELSDWIERRLRSHGLRADAAAVQRLSERVEGNLLAA
AQEIDKLVLLADGRVLDLEAMESLVADAARYDVFRLAETTFSGQPAAVIRMLAGLRAEGE
AVAALMPILIKELLRTASLAKVQANGGNLAAEMKAQGLWESRQAPFKRALQRHPEPRRWE
RFVAEAGLVDRMAKGRADGDAWVGLERLLVAVAEARAVRLLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaactccgccccgagcagcttgccggccagtccaatcagccgttgcagccggtctat
ctgatcgccggccccgagacgctgcgcgtgctggaggcggccgatgcggtgcgcgcccga
gcgcgcgccgaaggcattagcgaacgcgaagtcttcgacgccgatggccgcgagttcgac
tggaaccagctggatgcgaccttcaacgcgcccagtctgttcagtccgcgccggctggtg
gaaatacgcctgcccagcggcaagccgggcaaggacggtgccgatgtcatcacccgcttc
tgcgccaatccgccgccggacgtggtgctgctgatcaccgccaacgactggagcaaggcg
caccagggcaagtgggccgatgcggtaggacgcatcggcaccatctcggtggcctgggcg
atcaagccgcacgagttgtccgactggatcgagcgccgcctgcgcagccacggcctgcgt
gcggacgctgccgcagtgcagcgcctgagcgagcgggtggaggggaatctgctcgccgcc
gcgcaggaaatcgacaagctggtgctgctggccgatggcagggtgctggacctggaggcg
atggagtcgctggtcgccgatgccgcccgctacgacgtgttccggctggccgaaaccacc
ttctccgggcagccggcggcggtgatccgcatgctcgccggcctgcgcgccgagggtgag
gcggtggccgcactgatgccgatcctgatcaaggaactgctgcgcaccgcatcgctggcg
aaagtgcaggcaaatggcggcaacctcgccgccgaaatgaaggcgcaagggctgtgggaa
tcgcgccaggccccgttcaagcgcgcgctgcaacggcacccggaaccgcgccgctgggaa
cgcttcgtcgccgaagcagggctggtcgatcgcatggccaaaggccgcgccgacggcgac
gcctgggtcggcctggaacgcctgctggtggctgtggccgaagcgcgtgcggtgagattg
ctggcgtga
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