Xanthomonas hydrangeae: LMG31886_15660
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Entry
LMG31886_15660 CDS
T07925
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhd03019
]
LMG31886_15660 (rng)
03009 Ribosome biogenesis [BR:
xhd03009
]
LMG31886_15660 (rng)
Messenger RNA biogenesis [BR:
xhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMG31886_15660 (rng)
Ribosome biogenesis [BR:
xhd03009
]
Prokaryotic type
rRNA processing factors
LMG31886_15660 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TLP1_add_C
CHP02642
Motif
Other DBs
NCBI-ProteinID:
CAD7731511
LinkDB
All DBs
Position
LMG31886:1893285..1894784
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AA seq
499 aa
AA seq
DB search
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEL
GLERAAFLHANDVIRPAPAPASVVDTEETPIPPPPAASVPIVELLRDGQDIVVQVVKDPI
GTKGARLTTQISIPSRYLVLLPQSKIVGVSARIEDEAERLRLKTIVSEVSAQHGGFGYII
RTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGG
YLVIDQTEAMTTIDVNTGSFVGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFID
MDDAEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSETCGQCSG
RGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
IRFQSDDQYLQEQFDVVLL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagagattttggtcaacgtcaccccgcgcgagacccgcgtggcggtgatcgag
aacggcatgctgcaggaattgcatatcgagcgcggttggcgccggggcgtggtcggcaat
atctacaagggcaaggtgcagcgggtgatgcccggcatgcaggcggcgttcgtcgaactg
ggtctggagcgcgccgcgttcctgcacgccaacgacgtgatccgcccggcgccggcaccg
gctagcgtggtcgataccgaagaaaccccgattccgccaccgccggcggcctcggtgccg
atcgtggagctgttgcgcgacggtcaggacatcgtggtgcaggtggtcaaggacccgatc
ggcaccaagggcgcgcggctgaccacccagatcagcattccctcgcgctatctggtgctg
ctgccgcaatccaagatcgtcggggtgtcggcgcgcatcgaagacgaggccgagcggctg
cgtttgaagaccatcgtcagcgaagtctcggcccagcacggcggcttcggctacatcatc
cgtaccaatgccgaaggccagccggccgaggcgctggccgaggacatcgcctatctgtcg
cgggtctggaacgtggtggagcggcgcggccgcgaagcgccgccgtgcagcatcatctat
gaagacctgagcctgccgctgcgtgcggtgcgcgacctgatccgccgcgacgtggaaaag
gtcaaggtcgactccaacgagaccttcgtgcagctgcaggcgttcgtggccaagtacatg
ccggtgctggccgagcgcctggagctgtacaccggcgaccggccgatcttcgacctgtac
ggggtcgaggacgagatcgggcgcgcgctgaacaagcaggtgccgctcaagtccggcggc
tacctggtgatcgaccagaccgaggcgatgaccaccatcgacgtcaacaccggttcgttc
gtcggccagcgcaatctcgaagaaaccgtgttccgcaccaacctggaggccgcgcaggcg
gtggcgcggcagctgaggctgcgcaacctgggcgggatcatcatcatcgacttcatcgac
atggacgatgccgagcatcgccgccaggtgctgcgcacgctggagaaggcgctggcacgc
gatcacgccaagaccaccgtgtacgaattctcgccgctgggcctggtggagatgacccgc
aagcgcaccgtcgaaagcctggagcggcagctgtcggaaacctgcggccagtgcagcggg
cgcggcaccatcaagaccgccgagacggtgacctacgagatcttccgcgagatcacccgc
gcggtacgccagttcgacgccgcgcggctgctggtgatcgcctcgtccaaagtggtggcg
cgtatcaccgacgaagagtcggcggccgtggccgagctggaggaattcctcggcaagagc
atccgcttccagtccgacgaccagtatctgcaggagcagttcgatgtggtgctgctgtga
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