Xanthomonas hydrangeae: LMG31886_16250
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Entry
LMG31886_16250 CDS
T07925
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhd03016
]
LMG31886_16250 (truA)
Enzymes [BR:
xhd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LMG31886_16250 (truA)
Transfer RNA biogenesis [BR:
xhd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMG31886_16250 (truA)
Prokaryotic type
LMG31886_16250 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAD7731855
LinkDB
All DBs
Position
LMG31886:1961558..1962331
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AA seq
257 aa
AA seq
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MRYALGVEYDGSEFQGWQQLGEHGGPTVQARLQAALSSVADAPVQVICAGRTDAGVHGEC
QVVHFDSDAHRDPRSWTLGTTARLPPSIAVRWCVPAAADFHARFSARARRYRYRLLNRQI
RPALYRQTLSWERRPLDADAMHTAAQALLGENDFNAFRSVQCQAPHARRNLQAISVQRIG
EVVEMQVQANAFLHHMVRNIVGSLILVGTGEQPVDWIATLLAGRDRSVAGPTAPPQGLVF
VGPLYPAEWHLPAEVTQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacgcgctgggcgtggagtacgacggcagcgagtttcaaggctggcagcaattg
ggagaacacggcgggccgacggtgcaggccaggttgcaggcggccctgtcgtcggtcgcc
gatgctccggtacaggtgatctgcgcaggccgcaccgatgccggcgtccacggcgaatgc
caggtagtgcatttcgacagcgacgcgcaccgcgacccgcgcagctggacgttgggtacc
accgcgcggctgccgccctcgatcgcggtgcgctggtgcgtgccggcggcggccgacttc
catgcgcggttttccgcacgtgcccgccgttatcgttatcgtctgctcaatcggcagata
cgccccgcgctgtatcggcagaccctgagctgggagcggcgcccgctggatgcagatgcc
atgcacacagcggcgcaggccttgttgggcgagaacgacttcaacgcatttcgcagcgtg
caatgccaggcgccacatgcacgccgcaacctgcaggccatcagcgtgcagcggattggc
gaagtggtggagatgcaggtccaggccaatgcattccttcatcacatggtgcggaatatt
gttggctcgctgatcctggtcggaaccggagaacaaccggtcgactggatcgcgacgttg
ctggccggacgcgaccgctctgtggccgggccgacggcgccgccacaaggcctggtgttc
gtcgggccgttgtatcccgcagagtggcatctgcctgctgaggtcacccaatga
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