Xanthomonas hydrangeae: LMG31886_16610
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Entry
LMG31886_16610 CDS
T07925
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhd03016
]
LMG31886_16610 (truB)
Enzymes [BR:
xhd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMG31886_16610 (truB)
Transfer RNA biogenesis [BR:
xhd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMG31886_16610 (truB)
Prokaryotic type
LMG31886_16610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CAD7732060
LinkDB
All DBs
Position
LMG31886:1998507..1999460
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AA seq
317 aa
AA seq
DB search
MAPDSSTDLLKPRIVYRPLHGILLLDKPAGVSSNTALQSARRLLRAEKGGHTGSLDPLAT
GLLPLCLGEATKIAGVLLGSAKAYDAEVVLGITTDTDDADGEPLRERAVPELSEDALRAA
LAPFIGRIAQQAPIYSALKQGGEPLYAKARRGEIIEAPVREVDVHAIELIGYAAPRLQLR
VTCGSGTYIRSLARDLGEVLGCGAHIASLRRLWVEPFRTPQMITLEALSAALDAGADAQE
LLLPIRAGLADFARITLDQAHTARFRMGQRLRDAAFPDGQVAVFGPDGIPLGLGLVDLDG
RLSPQRLFNGLNEAQAC
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgattcgagcactgatcttttgaaaccccgcatcgtctatcgcccgttgcac
ggcatcctgttgctcgacaagccggctggagtcagctccaacaccgcattgcaatccgca
cgccgtttactgcgcgccgaaaagggcggccacaccggcagcctggatccgctggccacc
ggcttgttgccgttgtgtctgggcgaggccaccaagatcgccggcgtgttgcttggttcg
gccaaggcctacgacgccgaggtcgtgctgggtatcaccaccgataccgacgatgccgat
ggcgaaccgctgcgcgagcgtgcggtgcccgagttgagcgaagacgccctgcgtgcggcg
ctggcgccattcatcggccgtatcgcccagcaggcgccgatctactcggcactcaagcag
ggcggcgagccgctgtatgccaaggcacgccgcggcgagatcatcgaggcgccggtgcgc
gaagtcgatgtgcatgcgatcgaactgatcggatatgccgcgccacgcctgcaactgcgc
gtgacctgcggctcgggcacctacatccgcagcctggcgcgcgatctgggcgaggtgctt
ggctgcggcgcgcatatcgcctcgttgcgtcggctctgggtcgagccgttccgcaccccg
cagatgatcacgttggaagcgctgtctgcggcgctggatgccggtgccgatgcacaggaa
ttgttgctgccgatccgggccggattggccgattttgcgcggatcaccctggaccaggca
cacacggcccgtttccgcatgggtcagcgcttgcgcgatgccgcatttccagatgggcag
gtggccgtgttcggaccggacggaatccccttgggcctaggcctggtggacctggacggg
cggttgtcgccccagcgattgttcaatggactgaacgaagcccaggcttgttaa
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integrated database retrieval system
