Xanthomonas hydrangeae: LMG31886_16800
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Entry
LMG31886_16800 CDS
T07925
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMG31886_16800 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_16800 (uvrB)
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMG31886_16800 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMG31886_16800 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Cytokin_check_N
Motif
Other DBs
NCBI-ProteinID:
CAD7732161
LinkDB
All DBs
Position
LMG31886:2022793..2024814
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AA seq
673 aa
AA seq
DB search
MTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVIQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRKLIRHLSDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKDELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEITELVVRPTGLID
PVVEIRPVGTQVDDLMSEIHERIKLGDRVLVTTLTKRMSENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKITRSMQAAIDETDRRREKQVEYNLEHGITPKSVQRPISDIMEGA
REDAAEKKAGKGRSKSRQIAEDTVDYRAMGPAQIAGKLKSLEQKMYQHAKDLEFEAAAQI
RDQIQKLKAASLA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttttcagctcgtatccccgtactccccggcaggcgaccagcctgcggcc
atcgacaagctggtagccaatttcgaggccggcctggccaagcagaccctgttgggcgtg
accggctcgggcaagacctacaccatcgccaacgtgatccagcaggtgcaaaagccgacc
ctggtgatggcgccgaacaagacgctggcggcgcagttgtacggcgagttcaagtcgttc
tttccgaacaacgcggtggagtacttcgtcagctactacgactactaccagcccgaggcc
tatgtgccgtcgtcggataccttcatcgagaaggacagttcgatcaacgagcacatcgag
cagatgcggttgtccgccaccaagaccttgctgtcgcgtcgcgattcgttggtggtggct
acggtctcggcgatctacggtctgggcgcgccggaagactatttgtcgctgcgcttgatc
ctgtcggttggcgagcacatcgatcagcgcaagttgatccgtcatctcagcgatctgcag
tacacacgcaacgaattcgagctgacgcgcggcgcgttccgcgtgcgtggcgaggtgctc
gatgtcttccccgccgagtcggacactgaggcattgcgcatcgagttgttcgacggcgac
atcgaacagctgaccttgttcgatccgctcaccggcgagacgctgcgtaaattgcagcgc
tacaccgtgtatcccaagacgcattacgcgaccacgcgcgagcgtacgctcagtgcggtg
gatacgatcaaggacgagctcaaggagcggctggagcagctgtattcgcagaacaagctg
gtcgaagcgcagcgcctggcacagcgcacccagttcgacctggaaatgatggccgaggtg
ggcttctgcaacggcatcgaaaactactcgcggcatctcaccggcaaagcgcctggcgaa
ccgccaccgacgttgttcgactacttgccgccggatgcgctgctggtgatcgacgagtcg
catgtgaccattccgcagatcggcgcgatgtacaagggcgatcgttcgcgcaaggaaacg
ctggtggaattcggcttccgtcttccttcggcgttggataaccggccgttgcgtttcgaa
gagtgggaggcgcgctcgccgcgcagcatctacgtctcggccacaccgggtccatacgaa
ctgcgtgagtctgcaggcgagatcaccgagctggtggtgcgcccgaccggcctgatcgat
ccggtggtcgagatacgcccggtcggaacgcaggtcgacgacctgatgtccgagatccat
gagcgcatcaagctcggcgatcgtgtattggtcaccacgctgaccaagcgcatgtccgag
aacctcaccgaatacctgggcgaacatggcattcgggtgcgctacctgcattcggacatc
gatactgttgagcgggtggagatcattcgcgatctgcgccttggcaaattcgacgtgctg
gtcggcatcaatctgctgcgcgaaggtctggacatgccggaagtgtcgctggtggcgatc
ctggatgccgacaaggagggcttcctgcgttcgactggttcgttgatccagacgatcggg
cgcgccgcgcgcaacctgcgtggcaaggcaatcctgtatgccgacaagatcacgcgttcg
atgcaggcggcgatcgacgaaaccgaccgtcgtcgcgagaagcaggtcgagtacaacctc
gaacatggcatcacgccgaaatccgtgcagcgcccgatctccgacatcatggaaggcgcg
cgcgaggatgccgccgagaagaaagccggcaagggtcgttcgaagtcacgtcagatcgcc
gaagacacggtcgactaccgcgcgatggggccggcccagatcgccggcaagctcaagagc
ctggagcagaagatgtaccagcacgccaaggatctggaattcgaggccgcagcgcagatt
cgcgaccagatccagaaattgaaggcggcgagcctggcgtag
DBGET
integrated database retrieval system
