Xanthomonas hydrangeae: LMG31886_20440
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Entry
LMG31886_20440 CDS
T07925
Symbol
msbA_1
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LMG31886_20440 (msbA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhd02000
]
LMG31886_20440 (msbA_1)
Enzymes [BR:
xhd01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LMG31886_20440 (msbA_1)
Transporters [BR:
xhd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LMG31886_20440 (msbA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_30
nSTAND1
AAA_22
AAA_29
AAA_21
DUF3584
RsgA_GTPase
HUTI_composite_bact
DUF87
MMR_HSR1
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
CAD7734243
LinkDB
All DBs
Position
LMG31886:2441905..2443674
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AA seq
589 aa
AA seq
DB search
MTPSNDRPAPASSWRTYRRLLAFAKPYRLLLIAALIAALVEAAGTTGFLALMKPITDETF
IYKNAEVSRWLPVQIILLFVVRGIAGYITDMAMGKSARSIARDLRVKVMSKYLRLPGSRF
DSEPVPSMLIRLGSDSDQVAQAAVDAVKVMIQQSLQVIGALALMLWHSWQVTLTILVLAP
VLAWVMDKVARRYRRISHSIQESGAHLLQAADQTLSSHQEVKIYGAQQTEMERYGALADR
NLRLAMKVESTRGISTATVQMIGAIGLSALLFVAGAQALAGRLTAGDFVVLMTSMLTIIP
GLKQLTNVQNMVQRGLASAERLFSVLDSPDEPDQGAIPLKRAKGLIEFRDVTARYPGQVN
PALAGVSFVAQPGTVTAIVGRSGSGKSSLIKLIPRFYEAEAGQILLDGHPVQAYALADLR
RQIALVGQQVMLFDGSIADNVAYGEMRSADASQLERAILGANAMEFVAQLPDGLQSHVGT
KGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIA
HRLSTIEHADQVLVMDQGRIVERGTHSELLAQGGLYSHLHGMQFRERQA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgactccttccaacgaccgcccggcgccagcatcgtcctggcgcacgtaccgtcgcctg
ctggccttcgccaagccgtaccgtctgttgctgatcgccgcgctgattgccgcgctggtc
gaagcggcgggcaccaccggctttctggcgttgatgaagccgatcaccgacgaaaccttc
atctacaagaacgccgaagtcagtcgctggctgccggtgcagatcatcctgttgttcgtg
gtgcgcggcattgccggttacatcaccgatatggcgatgggcaagtccgcgcgcagcatc
gcgcgcgatctgcgtgtcaaggtgatgtccaagtatctgcgcctgccgggatcgcggttc
gattccgagccggtgccgtcgatgctgatacgcctgggttcggactcggatcaagtggcg
caggcggcggtggatgcggtcaaggtgatgatccagcagtcgttgcaggtgatcggtgcg
ttggcgctgatgctgtggcatagctggcaggtcacgctgaccatcctggtgctggcaccg
gtgctggcctgggtgatggacaaggtggcgcgacgctatcgccgcatcagccacagcatc
caggaaagcggcgcgcatctgttgcaggcggccgaccagaccttgtccagccatcaggag
gtcaagatctacggcgcgcaacagaccgaaatggagcgctacggcgcgctggccgaccgc
aatctgcggctggcgatgaaggtcgaatccacgcgtggcatttccacggccaccgtgcag
atgatcggcgcgatcggtctgtcggcgctgttgttcgtggccggtgcgcaggcactggcg
gggcggctgaccgcaggcgacttcgtggtgctgatgacctcgatgctgacgattattcct
ggcctcaagcagctcaccaatgtgcagaacatggtgcaacgcggcctggcgtcggccgag
cgcctgttctcggtgctcgacagccccgacgagccggaccaaggcgcgatcccgctcaag
cgtgcgaagggcttgatcgaattccgcgatgtcactgcgcgctatccgggtcaggtgaat
ccggcgctggcgggggtgagtttcgttgcgcagccgggcacggtgacggcgattgtcggg
cgctcgggcagcggtaaatccagcctgatcaagctgattccgcgcttctacgaagccgag
gccgggcagatcctgctcgacggtcatccagtgcaggcgtacgcgttggccgatctgcgc
cggcagatcgcgctggtcggccaacaggtgatgttgttcgacggcagcatcgccgacaac
gtggcctatggcgaaatgcgcagcgcagatgcgagccagttggagcgcgcgattctgggt
gccaatgcgatggagttcgtcgcgcagttgccggacggtttgcaatcgcacgtgggcacc
aagggcgggcgtctgtccggcgggcagcgccagcgcttggcgatcgcgcgcgcgatgctc
aaggacgcgccgatcctgattctggacgaagccaccgccgcgctggacaacgaatccgaa
cggctggtgcaggacgccttgcacaagctgatgccggaccgcaccacgctggtgatcgcg
caccgcctgtccacgatcgaacatgccgatcaggtactggtgatggatcagggccgcatc
gtcgagcgcggtacgcacagtgaattgctggcgcagggcgggttgtattcgcacctgcac
ggcatgcagttccgcgaacggcaggcatga
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