Xanthomonas hydrangeae: LMG31886_28860
Help
Entry
LMG31886_28860 CDS
T07925
Symbol
yraJ
Name
(GenBank) Outer membrane usher protein YraJ
KO
K07347
outer membrane usher protein
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMG31886_28860 (yraJ)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhd02000
]
LMG31886_28860 (yraJ)
02044 Secretion system [BR:
xhd02044
]
LMG31886_28860 (yraJ)
02035 Bacterial motility proteins [BR:
xhd02035
]
LMG31886_28860 (yraJ)
Transporters [BR:
xhd02000
]
Other transporters
Pores ion channels [TC:
1
]
LMG31886_28860 (yraJ)
Secretion system [BR:
xhd02044
]
Chaperone-usher system
Type 1 pilus assembly protein
LMG31886_28860 (yraJ)
Bacterial motility proteins [BR:
xhd02035
]
Pilus system
Fimbrial proteins
LMG31886_28860 (yraJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
PapC_N
Motif
Other DBs
NCBI-ProteinID:
CAD7739156
LinkDB
All DBs
Position
LMG31886:3446759..3449110
Genome browser
AA seq
783 aa
AA seq
DB search
MTLLATATCLGSAAAVDLADVAALPDQTPQSASALPQTLYLDVTLNQADRGLAPFELVDG
HLRGSVETLRKLGFILAERNAGELVDLDRLPDVEVRYDAALQRLALQVPLAQLSLSTTVL
KAEEVAPPSATASPGMLLNYDVYATRNAGASSVSLATELRGFGIGRGMVDTTAVFLAYDR
PQDQHWRSEAVRLDSAWQMDFPDTATSLSVGDFYSGFVDWSRSIRLGGVQIGRNYALQPY
RVLTPTPSFLGEAAVPSTIELYVDGLRQYSGQVPAGPFQLAAQPGISGTGQAQIVVTDAF
GRVRRLDFAFYGTPQLLARGISEWSAGIGHLRQDYGVRSFSYDARTVASATLRKGLRDDF
TIEAHAEAGGGVVNAGAGGIWLLGVGGVFNLAYAHSQMDALRGGQYVLGYAWNNRRFNFN
LGTQRTHGDYRDLGALQGALPARISDRAVFGVNVNPIGSLGTSYVRLSYPQGDTSRYASL
FWSRSFGRNWAANLSGNQNLDVRSDRSLYLSLSTTFGELRQASASMQRNGNRTGFVADLS
QPLPGDGDLGGIGWRLQGRAGDDANGGLAELGWLNRIGRYNLGVANQDGANFGYASASGS
LVWMNGRGFAARDIQDAFAVVSTDGQPGIPVRLENRLIGVTDARGTLLVTPLQSWQRNQL
SIDTLNLPADLRVDRVDTAVTPRQQSGVAVRFGITRVRAAIIVLHDAQGAPLPVGSVVQR
EGDAERVVVGYDGETYLDNLQSDNRLLVDLPQGRCSAQFTYPANPSGIPRVGPLQCVTEQ
KTP
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgctcgcgaccgccacctgcctgggaagcgccgcggctgtcgatctggccgac
gttgccgcgctgcccgatcagaccccgcaaagcgccagcgccctgccgcagacgctgtac
ctggatgtcaccctgaatcaggccgaccgcggcctggcgccgttcgaactggtcgacggc
cacctgcgtgggtcggtcgaaacgctgcgcaaactcggcttcatcctggccgagcgcaac
gccggcgagctggtcgatctggatcgcctgcccgatgtggaagtgcgctacgacgccgcg
ctgcagcggctggcgctgcaggtgccgctggcgcaactgtcgctctccaccacggtattg
aaagccgaagaagtcgccccgcccagcgccaccgcctccccgggcatgctgctcaattac
gacgtctatgccacgcgcaatgccggggccagcagcgtgtcgttggcgaccgaactgcgc
ggcttcggcatcggccgcggcatggtcgacaccaccgccgtgttcctggcctacgaccgt
ccgcaggaccagcactggcgcagcgaagcggtgcgtctggacagcgcctggcagatggat
ttcccggataccgccaccagcctcagcgttggcgatttctacagcggcttcgtcgactgg
agccgttcgatccgcctgggcggcgtgcagatcggccgcaattacgccttgcagccctat
cgcgtgctgacgccgacgccgagttttctgggcgaagcggcggtgccttcgaccatcgag
ctgtatgtcgatggcctgcgccaatacagcggccaggtgccggccgggccgtttcagctg
gccgcacaaccgggcatcagcggcaccggccaggcacagatcgtggtgaccgatgcgttc
ggccgcgtgcgccggctggacttcgcgttctacggcaccccgcaactgctggcgcgtggc
atttccgaatggtcggccgggatcggccacctacgccaggactatggcgtgcgctcgttt
tcctacgatgcgcgcacggtcgccagcgccacgctgcgcaagggcctgcgcgacgatttc
accatcgaggcgcatgccgaagccggcggcggcgtggtcaatgccggggccggcgggatc
tggctgctgggcgtgggcggggtgttcaatctcgcctatgcgcatagccagatggatgcg
ctgcgcggcggccagtacgtgctgggctatgcctggaacaaccgtcgtttcaacttcaat
ctcggcacccagcgcacccacggcgactaccgcgacctgggcgcgctgcagggcgcgttg
ccggcgcgcatcagcgaccgcgcggtgttcggcgtcaacgtcaatccgatcggctcgctg
ggcaccagctatgtgcggctgagctacccacaaggcgacacctcgcggtatgcgagcctg
ttctggtcgcgcagtttcgggcgcaactgggcggccaatctgtccggcaaccagaacctg
gatgtgcgcagcgaccgtagcctgtacctgtcgctgtcgaccacgttcggcgagttgcgc
caggccagcgcctcgatgcaacgcaacggcaaccgcaccggattcgtggccgatctgagc
cagccgctacccggcgacggcgacctgggcgggatcggttggcgcctgcaggggcgtgcc
ggcgacgatgccaacggcggcctggccgagctggggtggttgaaccgcatcggccgctac
aacctcggcgtcgccaaccaggatggcgccaacttcggctatgccagcgccagcggcagc
ctggtgtggatgaacggccgcggctttgccgcgcgcgatatccaggatgccttcgcggtg
gtctccaccgacggccagcccggcattccggtgcggctggaaaatcgcctgatcggcgtc
accgatgcgcgcggcacgctgctggtcaccccgctgcaatcgtggcagcgcaaccagttg
tcgatcgacaccttgaacctgccggcagacctgcgcgtggaccgcgtcgataccgcagtg
acgccgcgccagcaatccggcgtcgcggtgcgcttcggcatcacccgcgtgcgcgcggcg
atcatcgtattgcacgacgcacaaggcgccccgctgccggtgggcagcgtggtgcagcgc
gagggcgatgccgaacgcgtggtggtgggctacgacggcgaaacctatctggacaatctg
cagagcgacaatcgcctgctggtcgacttgccgcagggccgctgcagcgcgcagttcacc
tatccggccaacccgagcggcattccgcgggtgggaccactgcaatgcgtcaccgagcag
aaaacgccatga
DBGET
integrated database retrieval system
