Xanthomonas hydrangeae: LMG31886_30210
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Entry
LMG31886_30210 CDS
T07925
Symbol
ramB
Name
(GenBank) HTH-type transcriptional regulator RamB
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhd03000
]
LMG31886_30210 (ramB)
Transcription factors [BR:
xhd03000
]
Prokaryotic type
Helix-turn-helix
XRE family
LMG31886_30210 (ramB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_31
HTH_3
HTH_19
HTH_25
HTH_24
HTH_37
Sigma70_r4
MarR
HTH_26
Motif
Other DBs
NCBI-ProteinID:
CAD7739954
LinkDB
All DBs
Position
LMG31886:3592262..3593647
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AA seq
461 aa
AA seq
DB search
MPHTQPPLRHQLGLRLQRLRQRHGLTQAELARRLALSPSYLNQIERNQRPLTLAIQQRLK
ATLGDLEGLLDLDDPAALVEPLDESLRSLGHSLSAAELRVLTGNLPQVAQALLDLHRAHR
HLLERNAALELQIGADHAALPSLSPGEQVRDYFNRAHNYLPELDERAEALYAELGLTPDN
LALRLRQRLADRHGLLVQDATDLLSDKRSVDAQARVLWLPAHLRPGQQAFQMAAQLALLE
CAPLLDARIADAGFEDAERIALSRIGLSNYFAGALVMPYGEFLHSAQTCRYDIEWLADRF
DVGFEAVCHRLSTLQRRGAAGLPIFFMRVDRAGNVSKRHSATDFHFSHVGGACPLWIVYE
AFNQPDRILTQIARMPDGRRHFWLARQVSSGAPGYGRPRKTFALAMGCDLRHADQLVYAR
GWDLDAVDDAVPIGPGCLTCERSDCVQRAFPALPRLPASAR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccacacacgcagccacctctgcgccatcagctcggcctgcgcctgcagcggctgcgc
cagcgccatggcctgacccaggccgaactggcgcgccggctggcgttgtcgccgagctat
ctcaaccagatcgagcgcaaccagcgcccgttgacgctggcgatccagcagcggctcaag
gccaccctgggcgaccttgaaggcctgctggacctggacgaccccgccgcgctggtggaa
cccttggacgaatctctgcgcagccttggccacagcctgtcggccgccgagctgcgcgtg
ctcaccggcaatctgccgcaggtggcgcaggcactgttggatctgcaccgcgcccatcgg
catctgctcgagcgcaatgccgcactggaactgcagatcggtgccgaccacgccgcactg
ccgtcgctgtcgcccggcgagcaggtacgcgattacttcaatcgcgcgcacaactacctg
cccgaactggatgagcgcgcagaggcgctgtatgccgaactcgggctgaccccggacaac
cttgcgctgcggctgcgccaacgcctggccgatcgccacggcttgttggtgcaggacgcc
accgacctgctcagcgacaagcgcagcgtggatgcgcaggcacgcgtgctgtggctgcct
gcgcatctgcgccccggccaacaggccttccagatggcggcgcagttggcgttgctggag
tgtgcgccgctgctggacgcacgcatcgccgatgccggattcgaagacgccgagcgcatc
gcgttgtcgcgcattggtttgtcgaactatttcgccggcgccctggtgatgccgtatggc
gaatttctgcacagcgcgcagacctgccgctacgacatcgaatggctggccgatcgtttc
gatgtgggcttcgaggcggtctgccaccgcctcagcaccttgcagcgacgcggtgcggcc
gggttgccgatcttcttcatgcgggtggaccgcgccggcaatgtgtccaagcgtcactcg
gccaccgacttccacttctcgcatgtcggcggcgcctgcccgctgtggatcgtctacgaa
gccttcaatcagcccgaccgcatcctgacccagatcgcgcgcatgcccgatggccggcgc
catttctggcttgcgcgccaggtcagcagtggcgcgcccggttacggccgcccgcgcaag
acctttgcattggcgatgggctgcgacctgcgccatgccgatcaactggtgtatgcgcgc
ggctgggacctggatgcggtggacgatgcggtgccgatcggccccggttgcctgacctgc
gagcgcagcgactgcgtgcagcgtgccttcccggcattgccgcggttacctgccagcgcg
cgctag
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