Xanthomonas hydrangeae: LMG31886_30860
Help
Entry
LMG31886_30860 CDS
T07925
Symbol
uvrA_1
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMG31886_30860 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_30860 (uvrA_1)
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMG31886_30860 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMG31886_30860 (uvrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_23
AAA_16
RsgA_GTPase
AAA_25
AAA_21
nSTAND1
nSTAND3
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CAD7740464
LinkDB
All DBs
Position
LMG31886:3677762..3680728
Genome browser
AA seq
988 aa
AA seq
DB search
MAMDFIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQP
RCPDHGFPLEAQTVSQMVDHMLNQDQEQRYMLLAPVIRERKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPPLALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGEGMVAVQSLD
DPAAAPHLFSSKYSCPVCDYSLPELEPRLFSFNAPVGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAVWNTLPAKVRQAVLFGSGDEVISF
TYFTDAGGRTTRKHRFEGILPNLERRYRETESPAVREELTKYVSQQPCPACNGTRLNRAA
RNVFVADRPLPELVVLPVNEALSFFRGLSLPGWRGEIASKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADYVLDIGPGAGVHGGEICAQGSLQDILDAPGSLTGQYLSGKRRI
EIPKQRHKPNPKMMLHLRGATGNNLKNVDLDIPAGLLTCITGVSGSGKSTLINDTLFSLA
ANEINGASHPVAAHREVENLDLFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEIR
YKGFNISDVLQMTVEDALRLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGSILVSGTPEEVAAHKASYTGQFLAKMLPSVKARETRPAAMANKPDA
RPPRKIKPEKVAKVAKSATKKTAKKKAS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgac
ctcgacctgcctcgcgacaaattgatcgtgatcaccggcctgtccggctcgggcaagtcg
tcgttggcgttcgacaccatctatgcggagggccagcgccgctacgtcgagtcgctgtcg
gcgtatgcgcgccagttcctcagcgtgatggaaaagccggacctggaccacatcgaaggg
ttgtccccggcgatttcgatcgaacagaaatcgacctcgcacaacccgcgctccacggtc
ggcacgatcaccgagatctacgactacctgcgcctgctgtacgcgcgtgtcggtcagccg
cgttgcccggaccatggcttcccactggaagcgcagaccgtcagccagatggtcgaccac
atgctcaaccaggaccaggagcagcgttacatgctgctggcgccggtgatccgcgagcgc
aagggcgagcatgcgcaggtgttcgagcagctgcgcgcgcagggctttgtgcgcgtgcgt
gtggatggcgagctgtacgagatcgacgcggtgccgccgctggcgctgcgccagaagcac
accatcgaggcggtaatcgaccgcttccgtccgcgcgaagacatcaagcaacggctggcg
gaaagtttcgagactgcgctcaagctcggcgaaggcatggtcgcggtgcagtcgctggac
gacccggccgcggccccgcacctgttctcgtccaagtacagctgcccggtctgcgattac
tcgctgccggagctggaaccgcggctgttttcgttcaacgcaccggtgggcgcctgcccc
agctgcgatggcctgggcgtggccgagttcttcgaccccgatcgcgtcgtggtgcatccg
gagctatcgctgtcggccggcgcggtgcgcggctgggatcggcgcaatgcctattatttc
cagctgatcgcctcgctggccaagcactacaagttcgacgtggacgcagtgtggaacacg
ctgccggccaaggtgcgccaggcggtgctgttcggcagcggcgatgaggtgatcagtttc
acctacttcaccgatgcgggcgggcgcaccacccgcaaacaccgtttcgagggcatcctg
ccgaacctggaacgccgctaccgcgagaccgaatcgccggccgtgcgcgaagagctgacc
aagtacgtcagccagcagccctgcccggcctgcaacggcacgcgcctgaatcgtgccgcg
cgcaacgtgttcgttgccgaccgcccgttgcccgagctggtggtgctgccggtcaacgaa
gcactgagctttttccgcggcttgtcgctgccgggttggcgtggcgagatcgccagcaag
atcgtcaaggagatcggcgagcggctgggcttcctggtcgatgtgggcctggattacctg
accctggaacgcaaggccgacaccttgtccggtggcgaggcacagcgcatccggctggcc
agccagatcggcgccggcctggtcggggtgatgtatgtgctggatgagccgtcgatcggc
ctgcatcagcgcgacaacgaacgcctgctgggcacgctgacgcggctgcgcgacctgggc
aataccgtcatcgtcgtcgagcatgacgaagatgcgatccgcctggccgattatgtgctg
gatatcggccccggcgccggcgtgcacggtggcgaaatctgcgcgcaaggctcgttgcag
gacatcctggatgcacccggctcgctgaccggccagtacctgtcgggcaagcgccgcatc
gagattcccaagcagcgccacaagcccaacccgaagatgatgctgcatctgcgcggggca
accggcaacaacctgaagaatgtcgacctggatattccggccggcctgttgacctgcatc
accggcgtgtccggctcgggcaagtccacgctgatcaacgacaccttgttctcgctggcg
gccaacgagatcaacggcgcctcgcatccggtggccgcgcatcgcgaggtggagaatctg
gatctgttcgacaaggtcgtggatatcgaccagtcgccgatcgggcgcacgccgcgctcc
aatccagccacctacaccggcatgttcaccccgttgcgcgagttgttcgcgcaggtgccg
gaagcgcgcgcgcgcggctattcgccgggccgtttcagcttcaacgtgcgcggcgggcgc
tgcgaggcctgccagggcgatggcctgatcaaggtggaaatgcacttcctgcccgacgtc
tacgtgccctgcgatgtctgccacggcaagcgctacaaccgcgagacgctggaaatccgc
tacaagggcttcaacatcagcgacgtgctgcagatgaccgtcgaggacgcgctgcggctg
ttcgagccggtgccgtcgatcgcacgcaagctggaaaccctggtggatgtgggcctgagt
tacatcaagctgggccagagcgcgaccacgctgtccggcggtgaggcgcaacgcgtcaag
ttgtccaaggagctgtcgcgtcgcgataccggacgcaccctgtacatcctcgacgagccg
accaccggcctgcacttccacgacatcgaagcgctgctcggggtgctgcacaagctgcgc
gacgagggcaacacggtggtggtgatcgaacacaatctggacgtgatcaagaccgccgac
tggatcgtggatctgggcccggaaggtggccatcgcggcggcagcatcctggtctccggc
acgccggaagaggtggccgcgcacaaggcgtcctacaccgggcagttcctggccaagatg
ctgccatcggtgaaggcgcgcgagacccggccggcggcgatggccaacaagccggatgcg
cgcccgccacgcaagatcaaaccggagaaggtggcgaaagtcgccaagtccgccaccaag
aaaaccgcaaagaagaaggcaagctga
DBGET
integrated database retrieval system
