Xanthomonas hydrangeae: LMG31886_36030
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Entry
LMG31886_36030 CDS
T07925
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00260
Glycine, serine and threonine metabolism
xhd00460
Cyanoamino acid metabolism
xhd00630
Glyoxylate and dicarboxylate metabolism
xhd00670
One carbon pool by folate
xhd00680
Methane metabolism
xhd01100
Metabolic pathways
xhd01110
Biosynthesis of secondary metabolites
xhd01120
Microbial metabolism in diverse environments
xhd01200
Carbon metabolism
xhd01230
Biosynthesis of amino acids
xhd01240
Biosynthesis of cofactors
xhd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LMG31886_36030 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LMG31886_36030 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LMG31886_36030 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LMG31886_36030 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LMG31886_36030 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LMG31886_36030 (glyA)
Enzymes [BR:
xhd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LMG31886_36030 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Phage_capsid
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CAD7743758
LinkDB
All DBs
Position
LMG31886:complement(4224236..4225489)
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AA seq
417 aa
AA seq
DB search
MFSRDVRLETYDPELAKAIADEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIERIKQVFGADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNVSGKLFNAVQYGVNEQGLIDYDEVQRLATEHKPKMVVAGFSAYSQK
IDWARFRAIADSVGAYLFVDMAHVAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIV
AKGASEELQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMAN
TLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTS
GLRLGTPAITTRGYLEQDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgcgacgtccgactggaaacctacgaccccgaactggccaaggccatcgcc
gacgaagccggccgccaggaggatcacgtcgagctgatcgccagcgaaaactattgcagc
ccgctggtgatggaagcccagggcagccagctgaccaacaaatacgccgaaggctatccg
ggcaaacgctattacggtggctgcgagttcgtcgacatcgccgagcagctggcgatcgag
cgcatcaagcaggtgttcggagcagactatgcgaacgtgcagccgcacagcggctcgcag
gccaaccaggcggtgtatctggcgctgctgcagcccggcgacaccatcctgggcatgagt
ctggcccatggcggtcacctgacccacggcgccaaggtcaatgtctccggcaagctgttc
aacgccgtgcagtacggtgtcaacgagcagggcctgatcgactatgacgaggtccagcgc
ctggccaccgagcacaagccgaagatggtcgtggcgggtttctcggcgtattcgcagaag
atcgattgggcgcgcttccgcgccatcgccgacagtgtcggtgcgtacctgttcgtggac
atggcgcacgtggccggcctggtcgctgccggcgtgtatcccagcccgatggagcatgcg
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcgtg
gccaagggcgccagcgaagaactgcagaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggcccgctgatgcatgtcatcgcggccaaggcggtggcgttcaaggaagcgctg
gaacccgcgttcaagacctaccagcagcaggtggtgaagaacgcccaggccatggccaac
acgctgatcgcgcgcggctacaagatcgtctccggcggcaccgaaaatcatctgatgctg
gtggacatgatcggccgcgacgtctccggcaaggacgcagaagccgcgctcggcaaggcc
cacatcaccgtcaacaagaacgcagtgcccaacgacccgcgttcgccgttcgtcacctcc
ggcctgcgcctgggcaccccggcgatcaccacgcgtggttatctggaacaggacagcatc
gatctggccaactggatcgccgacgtgctcgacgctcccaccgacgaagcggtgctggcg
aaggtgcgcgacgcggtgactgcgcagtgcaagaagtatccggtgtatggctga
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