Xanthomonas hydrangeae: LMG31886_36480
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Entry
LMG31886_36480 CDS
T07925
Symbol
pel_3
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00040
Pentose and glucuronate interconversions
xhd01100
Metabolic pathways
xhd01120
Microbial metabolism in diverse environments
xhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LMG31886_36480 (pel_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMG31886_36480 (pel_3)
Enzymes [BR:
xhd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LMG31886_36480 (pel_3)
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
CAD7744028
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All DBs
Position
LMG31886:complement(4290183..4291316)
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AA seq
377 aa
AA seq
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MKPKFSTAAAASLFVGSLLVVGVACADPALEVATTGWATQNGGTKGGSKAAAANIYTVKN
AAELKNALKASVGSNGRIIKISGIIDVSEGKPYTKTSDMKARARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNLTIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGATNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANFVTISYSAFKSHEKNDLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTTHPVYKFSHAHGVGKESK
IFSERNAFDISGVSGCDKIAADYGGSVYRDQGSLLNGKALTCTWNTNIGWTPPYTYSLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcaacggcggccgccgcgtcgctgtttgtcgggtcgttgctggtc
gttggcgttgcctgcgccgatcctgcactggaagttgcaaccactggttgggcaacacag
aacggtgggaccaaaggcggctccaaagcggccgctgccaacatctacacggtcaagaat
gccgccgagctgaagaacgcgctgaaggccagcgtgggcagcaacggacgcatcatcaag
atcagcggcatcatcgatgtcagtgaaggcaagccctacaccaagacctcggatatgaag
gcgcgcgcgcgtctggacgtgccgaccaagaccacgctgatcggcatcaccagcaacgcg
gaaattcgcgaaggctatttctacgtcaaggccaacgacgtcatcatccgcaatctcacc
atcgaaaatccgtgggatccggaaccggtctgggatccggacgatggcagcgccggcaac
tggaatgccgagtacgacggcctgacggtggaaggcgccaccaacgtgtgggtggaccat
gtcaccttcaccgatggtcgccgcaccgacgatcagaacggcaccgccaatggccgcccc
aagcagcatcacgatggcgcgatggacgtcaagaaaggcgccaacttcgtgacgatttcc
tactcggcgttcaagtcgcacgagaagaacgatctgatcggttccagcgacagcgcctcc
agcaccgacagcggcaagctcaaggtgaccatccacaacaccttgttcgaaaacatctcc
gcacgcgcgccgcgggtgcgcttcggccaggtgcatctgtacaacaactaccacgttggc
agcaccacccatccggtctacaagttctcgcacgcgcatggtgtgggcaaggaatcgaag
atcttctccgagcgtaatgccttcgacatcagcggtgtgagcggttgcgacaagatcgcg
gccgattacggcggcagcgtgtatcgcgatcagggctcgctgctcaacggcaaggcgctg
acctgcacgtggaataccaacatcggttggaccccgccgtacacctacagcctgctgtcg
gccgacaaggtcgctgcagacgtcaaggcaaaggccggcgccggaaagctgtaa
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