KEGG   Xanthomonas hydrangeae: LMG31886_36480
Entry
LMG31886_36480    CDS       T07925                                 
Symbol
pel_3
Name
(GenBank) Pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
xhd  Xanthomonas hydrangeae
Pathway
xhd00040  Pentose and glucuronate interconversions
xhd01100  Metabolic pathways
xhd01120  Microbial metabolism in diverse environments
xhd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:xhd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    LMG31886_36480 (pel_3)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LMG31886_36480 (pel_3)
Enzymes [BR:xhd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     LMG31886_36480 (pel_3)
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: CAD7744028
LinkDB
Position
LMG31886:complement(4290183..4291316)
AA seq 377 aa
MKPKFSTAAAASLFVGSLLVVGVACADPALEVATTGWATQNGGTKGGSKAAAANIYTVKN
AAELKNALKASVGSNGRIIKISGIIDVSEGKPYTKTSDMKARARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNLTIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGATNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANFVTISYSAFKSHEKNDLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTTHPVYKFSHAHGVGKESK
IFSERNAFDISGVSGCDKIAADYGGSVYRDQGSLLNGKALTCTWNTNIGWTPPYTYSLLS
ADKVAADVKAKAGAGKL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaagccgaaattttcaacggcggccgccgcgtcgctgtttgtcgggtcgttgctggtc
gttggcgttgcctgcgccgatcctgcactggaagttgcaaccactggttgggcaacacag
aacggtgggaccaaaggcggctccaaagcggccgctgccaacatctacacggtcaagaat
gccgccgagctgaagaacgcgctgaaggccagcgtgggcagcaacggacgcatcatcaag
atcagcggcatcatcgatgtcagtgaaggcaagccctacaccaagacctcggatatgaag
gcgcgcgcgcgtctggacgtgccgaccaagaccacgctgatcggcatcaccagcaacgcg
gaaattcgcgaaggctatttctacgtcaaggccaacgacgtcatcatccgcaatctcacc
atcgaaaatccgtgggatccggaaccggtctgggatccggacgatggcagcgccggcaac
tggaatgccgagtacgacggcctgacggtggaaggcgccaccaacgtgtgggtggaccat
gtcaccttcaccgatggtcgccgcaccgacgatcagaacggcaccgccaatggccgcccc
aagcagcatcacgatggcgcgatggacgtcaagaaaggcgccaacttcgtgacgatttcc
tactcggcgttcaagtcgcacgagaagaacgatctgatcggttccagcgacagcgcctcc
agcaccgacagcggcaagctcaaggtgaccatccacaacaccttgttcgaaaacatctcc
gcacgcgcgccgcgggtgcgcttcggccaggtgcatctgtacaacaactaccacgttggc
agcaccacccatccggtctacaagttctcgcacgcgcatggtgtgggcaaggaatcgaag
atcttctccgagcgtaatgccttcgacatcagcggtgtgagcggttgcgacaagatcgcg
gccgattacggcggcagcgtgtatcgcgatcagggctcgctgctcaacggcaaggcgctg
acctgcacgtggaataccaacatcggttggaccccgccgtacacctacagcctgctgtcg
gccgacaaggtcgctgcagacgtcaaggcaaaggccggcgccggaaagctgtaa

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