Xanthomonas hydrangeae: LMG31886_36920
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Entry
LMG31886_36920 CDS
T07925
Symbol
metC
Name
(GenBank) Cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00260
Glycine, serine and threonine metabolism
xhd00270
Cysteine and methionine metabolism
xhd00450
Selenocompound metabolism
xhd00670
One carbon pool by folate
xhd01100
Metabolic pathways
xhd01110
Biosynthesis of secondary metabolites
xhd01230
Biosynthesis of amino acids
Module
xhd_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LMG31886_36920 (metC)
00270 Cysteine and methionine metabolism
LMG31886_36920 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LMG31886_36920 (metC)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LMG31886_36920 (metC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhd04147
]
LMG31886_36920 (metC)
Enzymes [BR:
xhd01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
LMG31886_36920 (metC)
Exosome [BR:
xhd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LMG31886_36920 (metC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
GDC-P
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CAD7744274
LinkDB
All DBs
Position
LMG31886:complement(4340255..4341442)
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AA seq
395 aa
AA seq
DB search
MSNRTATSHDGARELSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSR
THNPTRFAYERCVASLEGGARAFAFASGMAATSTVTELLDAGSHVVAMDDLYGGTFRLFE
RVRRRTAGLDFSFVDLTDPAAFEAAIRPDTKMVWIETPTNPMLKLVDIAAIAAIARKHGL
LIVVDNTFASPILQRPLSLGADIVVHSATKYLNGHSDMVGGIAVVGDNTELAEQLAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIAKVIYPGLASHPQHA
LAKTQMTGFGGIVSIVLKGGFDAARRFCERTELFTLAESLGGVESLVNHPAVMTHASIPV
ARREQLGISDALVRLSVGVEDLGDLQNDLDAALRR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgcaccgcaaccagccacgatggcgcgcgcgaactttcgcttgccacgctg
gcgatccatggagggcagtcgccggatcccagcaccggcgcggtgatgccgccgatctat
gcgacgtccacgtatgcgcagtccagccccggcgagcatcagggcttcgaatactcgcgc
acccacaaccccacgcgctttgcctatgagcgctgcgtcgcgtcgctggaaggcggcgcg
cgcgcgttcgcgttcgcctccggcatggccgccacctccacggtgacggaattgctggat
gccggcagccacgtggtggcgatggacgacctgtatggcggcaccttccgcctgttcgag
cgcgtgcgccgccgcaccgccggcctggacttcagcttcgtcgacctgaccgacccggcc
gccttcgaagccgcgatccgccccgacaccaagatggtgtggatcgaaaccccgaccaac
ccgatgctcaagctggtcgacattgccgccattgctgccatcgcgcgcaagcacggcctg
ctgatcgtggtcgacaataccttcgcctcgccgatcctgcagcgcccgctcagcctgggc
gccgacatcgtcgtgcactcggccaccaagtacctcaacggccactcggacatggtcggc
ggcatcgcggtggtcggtgacaacaccgagctggccgagcaactggcgttcctgcagaac
tccatcggcggcgtgcaagggccgttcgacagcttcctcgccctgcgcggcctcaagacc
ctgccgctgcgcatgcgcgcgcattgcgagaacgctctggcgctggcgcaatggctggaa
acccatcccgcgattgcaaaagtgatctatcccggcctggcctcgcacccgcagcacgcg
ctggccaagacgcagatgaccggtttcggcggcatcgtctcgatcgtcctcaagggcggc
ttcgacgcggccaggcggttttgcgaacgcactgaactcttcaccctggccgaatcgctc
ggtggcgtggagagtctggtgaatcatcctgcggttatgacgcatgcctccatccccgtg
gcccgccgcgaacagcttgggatcagcgatgcgctggtgcggctgagcgtgggggttgag
gatttgggggatttgcaaaatgaccttgacgctgcgttgcgtaggtaa
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